| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 47.58 (cM) |
| QTL Span: | 47.58-47.58 (cM)
31.7-31.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs209784468 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Danish Holstein, Nordic Red, and Danish Jersey cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to whole-genome sequence variants, and analyzed for incidence of feet and leg disorders. |
| Analysis: | A modified linear mixed model and a linear mixed model were used for association analysis. |
| Software: | IMPUTE2, Minimac2, EMMAX, DMU, METAL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wu X, Guldbrandtsen B, Lund MS, Sahana G |
| Affiliation: | Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, DK-8830 Tjele, Denmark |
| Title: | Association analysis for feet and legs disorders with whole-genome sequence variants in 3 dairy cattle breeds |
| Journal: | Journal of dairy science, 2016, 99(9): 7221-31 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | EMMAX method |
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