Release 56
(Apr 24, 2025)

QTL 124127 Description:

 Trait Information
Trait name: Coat texture Vertebrate Trait Ontology: Coat/hair morphology trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: CTEX Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:23
QTL Peak Location:47.58 (cM)
QTL Span:47.58-47.58 (cM)
33.0-33.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110887052
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCE0.6000
P_values0.001
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian cattle.
     Breeds associated:
    Design:Animals were genotyped for 712,122 SNPs and analyzed for hairiness phenotype.
    Analysis:Genome-wide rapid association with mixed model and regression (GRAMMAR-gamma) was used.
    Software:GenABEL in R
    Notes: 
    Links:Edit

     Reference
    Authors:Karacaƶren B
    Affiliation:Faculty of Agriculture, Akdeniz University, Antalya 07059, Turkey
    Title:Investigations on Genetic Architecture of Hairy Loci in Dairy Cattle by Using Single and Whole Genome Regression Approaches
    Journal:Asian-Australasian journal of animal sciences, 2016, 29(7): 938-43
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:GRAMMAR-gamma analysis
    User inputs on reference #26954150
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  • Cite this Data:

    Animal QTLdb: QTL124127 was published in 2016, and was curated into QTLdb on 2017-01-13. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:124127

     

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