| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 73.85 (cM) |
| QTL Span: | 73.85-73.85 (cM)
55.9-55.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109341458 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 8.53E-10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #126908
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were AI Holstein sires.
Animal breed (IDs) involved: |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for EBV for calving and fertility traits. A total of 42,215 SNPs were used for analysis. |
| Analysis: | Combined linkage disequilibrium and linkage analysis was conducted. |
| Software: | ASReml, R software, PLINK, GCTA |
| Notes: | *Reported SNP endpoints are approximated based on genome position of interval |
| Links: | Edit |
| Reference |
|---|
| Authors: | Müller MP, Rothammer S, Seichter D, Russ I, Hinrichs D, Tetens J, Thaller G, Medugorac I |
| Affiliation: | Chair of Animal Genetics and Husbandry, Ludwig-Maximilians-Universität Munich, Veterinärstr. 13, 80539 Munich, Germany |
| Title: | Genome-wide mapping of 10 calving and fertility traits in Holstein dairy cattle with special regard to chromosome 18 |
| Journal: | Journal of dairy science, 2017, 100(3): 1987-2006 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Mixed linear model association analysis; EBV |
User inputs on reference #28109604
Add your comments
Note similar findings
Note contradictions
|
