Release 56
(Apr 24, 2025)

QTL 131452 Description:

 Trait Information
Trait name: Body circumference Vertebrate Trait Ontology: n/a
Trait details: heart girth at 18 months Product Trait Ontology: n/a
Symbol: BODYCIR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:25
QTL Peak Location:12.66 (cM)
QTL Span:12.66-12.66 (cM)
8.0-8.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41664150
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #131452
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 v2 BeadChip and analyzed for growth traits at four ages. A total of 42,307 SNPs were used for analysis.
    Analysis:The fixed and random model circuitous probability unification model (FARMCPU) was used to perform single-SNP analysis.
    Software:R 3.1.1, DMU
    Notes: 
    Links:Edit

     Reference
    Authors:Zhang X, Chu Q, Guo G, Dong G, Li X, Zhang Q, Zhang S, Zhang Z, Wang Y
    Affiliation:Key Laboratory of Agricultural Animal Genetics and Breeding, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, P.R. China.
    Title:Genome-wide association studies identified multiple genetic loci for body size at four growth stages in Chinese Holstein cattle.
    Journal:PloS one, 2017, 12(4): e0175971
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28426785
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL131452 was published in 2017, and was curated into QTLdb on 2017-06-02. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:131452

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team