| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 18.70 (cM) |
| QTL Span: | 18.70-18.70 (cM)
18.8-18.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs135892307 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Suggestive |
 |
P_values | <1 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | S100A10 (S100 calcium binding protein A10) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Simmental cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for carcass and meat quality traits. A total of 677,855 SNPs were used for analysis. |
| Analysis: | A compressed mixed linear model was used for single-marker association analysis. |
| Software: | GAPIT |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xia J, Fan H, Chang T, Xu L, Zhang W, Song Y, Zhu B, Zhang L, Gao X, Chen Y, Li J, Gao H |
| Affiliation: | Institute of Animal Science, Chinese Academy of Agricultural Science, Beijing, China |
| Title: | Searching for new loci and candidate genes for economically important traits through gene-based association analysis of Simmental cattle |
| Journal: | Scientific reports, 2017, 7: 42048 |
| Links: |
PubMed | Abstract | List all data
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