Release 56
(Apr 24, 2025)

QTL 163927 Description:

 Trait Information
Trait name: Milk protein yield Vertebrate Trait Ontology: Milk protein amount
Reported name: (n/a) Product Trait Ontology: Milk protein yield
Symbol: PY Clinical Measurement Ontology: Milk protein yield
 QTL Map Information
Chromosome:13
QTL Peak Location:92.52 (cM)
QTL Span:92.52-92.52 (cM)
77.6-77.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41710168
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
P_values<0.05
Dominance effect:0.024
Additive effect:0.041
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein and Jersey dairy cattle.
     Breeds associated:
    Design:Animals were genotyped using six different SNP arrays, with data imputed to 50K, and analyzed for milk composition, productive life, daughter pregnancy rate, and somatic cell score.
    Analysis:Additive and dominance effects for each SNP were estimated using the SNP-BLUP method and mixed models.
    Software:MMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Sun C, VanRaden PM, Cole JB, O'Connell JR
    Affiliation:University of Maryland School of Medicine, Baltimore, Maryland, United States of America
    Title:Improvement of prediction ability for genomic selection of dairy cattle by including dominance effects
    Journal:PloS one, 2015, 9(8): e103934
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:yield deviation
    User inputs on reference #25084281
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  • Cite this Data:

    Animal QTLdb: QTL163927 was published in 2015, and was curated into QTLdb on 2018-10-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:163927

     

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