| QTL Map Information |
|---|
| Chromosome: | 29 |
| QTL Peak Location: | 16.42 (cM) |
| QTL Span: | 16.42-16.42 (cM)
11.8-11.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110238419 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 0.02 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for digital cushion thickness. A total of 579,449 SNPs were used for analysis. |
| Analysis: | Mixed model EMMAX was used. |
| Software: | Golden Helix SVS, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Stambuk C R, Staiger E A, Nazari-Ghadikolaei A, Heins B J, Huson H J |
| Affiliation: | Department of Animal Science, Cornell University, Ithaca, NY 14853 |
| Title: | Phenotypic characterization and genome-wide association studies of digital cushion thickness in Holstein cows |
| Journal: | Journal of dairy science, 2020, 103(4): 3289-3303 |
| Links: |
PubMed | Abstract | List all data
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