| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs43326894 |
| Peak: | |
| Lower, "Significant": | rs109601200 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.54113% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #220485
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Canadian Angus cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek Genomic Profiler Bovine 130K SNP array and analyzed for teat and udder structure. A total of 103,980 SNPs were used for analysis. |
| Analysis: | Weighted single-step GWAS was performed using an animal model. |
| Software: | BLUPF90, POSTGIBBSF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Devani Kajal, Plastow Graham, Orsel Karin, Valente Tiago S |
| Affiliation: | Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada |
| Title: | Genome-wide association study for mammary structure in Canadian Angus cows |
| Journal: | PloS one, 2020, 15(8): e0237818 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #32853245
Add your comments
Note similar findings
Note contradictions
|
