| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
14.5-14.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43585636 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.00008128305162 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Romanian Spotted and Romanian Brown dairy cattle. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Axiom Bovine v3 SNP chip, and association analysis was performed for somatic cell score. |
| Analysis: | A random-regression test-day model was implemented for the first stage of GWAS. For the second stage, de-regressed proofs were used as phenotypes in the GWAS function of the rrBLUP package. |
| Software: | BLUPF90, DRP in R, rrBLUP v.4.6.1, qqman in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ilie DE, Mizeranschi AE, Mihali CV, Neamț RI, Goilean GV, Georgescu OI, Zaharie D, Carabaș M, Huțu I |
| Affiliation: | The Molecular Research Department, Research and Development Station for Bovine Arad, Bodrogului Street, No. 32, 310059 Arad, Romania |
| Title: | Genome-Wide Association Studies for Milk Somatic Cell Score in Romanian Dairy Cattle |
| Journal: | Genes, 2021, 12(10):1495 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Romanian Brown; parity 2 |
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