| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
16.9-16.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs135904081 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | 359.02 |
| Additive effect: | -158.08 |
| Associated Gene: | SLC22A7 (solute carrier family 22 member 7) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #256214
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in the SLC22A7, NGFR, ARNTL, and PP2R2B genes, and association analysis was performed for milk yield and composition traits. |
| Analysis: | Association analyses for SNPs or haplotype blocks were performed using the mixed procedure with an animal model. |
| Software: | Haploview 4.2, SAS 9.13, DMU v6.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Jia R, Fu Y, Xu L, Li H, Li Y, Liu L, Ma Z, Sun D, Han B |
| Affiliation: | Dept of Animal Genetics and Breeding, College of Animal Science and Technology, Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Agriculture and Rural Affairs, China Agricultural University, Beijing, China |
| Title: | Associations between polymorphisms of SLC22A7, NGFR, ARNTL and PPP2R2B genes and Milk production traits in Chinese Holstein |
| Journal: | BMC genomic data, 2021, 22(1): 47 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #34732138
Add your comments
Note similar findings
Note contradictions
|
