| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.17E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Simmental beef cattle. |
| Breeds associated:
|
| Design: | Analysis was performed to detect CNV regions associated with production traits. |
| Analysis: | A mixed linear model was used. |
| Software: | Samtools v1.8.0, Breakdancer v1.1.2, Pindel v0.2.4, CNVnator v0.3, BEDTools v2.25.2, ParseCNV v2.0, EMMAX |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yang L, Niu Q, Zhang T, Zhao G, Zhu B, Chen Y, Zhang L, Gao X, Gao H, Liu GE, Li J, Xu L |
| Affiliation: | Key Laboratory of Animal Genetics Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China |
| Title: | Genomic sequencing analysis reveals copy number variations and their associations with economically important traits in beef cattle |
| Journal: | Genomics, 2021, 113(1 Pt 2): 812-820 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | deletion |
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