| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | 83.33 (cM) |
| QTL Span: | 83.33-83.33 (cM)
73.2-73.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110859603 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.46E-3 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk fatty acid content. A total of 40,604 SNPs were used for analysis. |
| Analysis: | GWAS analyses were performed with the quantitative trait procedure (additive model) and empirical p-values estimated based on the Wald statistic. |
| Software: | PLINK, R software |
| Notes: | Genome-wise suggestive (p-val 0.1) corresponds to nominal p-value 2.46E-6. Only data below this threshold have been entered. |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li C, Sun D, Zhang S, Wang S, Wu X, Zhang Q, Liu L, Li Y, Qiao L |
| Affiliation: | Beijing Dairy Cattle Center, Beijing, China. |
| Title: | Genome wide association study identifies 20 novel promising genes associated with milk fatty acid traits in Chinese Holstein. |
| Journal: | PloS one, 2014, 9(5): e96186 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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