| QTL Map Information |
|---|
| Chromosome: | 26 |
| QTL Peak Location: | 37.82 (cM) |
| QTL Span: | 37.91-38.72 (cM)
26.1-26.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs43043628 |
| Peak: | |
| Lower, "Significant": | rs110035524 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SORCS3 (sortilin-related VPS10 domain containing receptor 3) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #56759
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Hanwoo cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for growth and meat quality traits. A total of 39,501 SNPs were used for analysis. |
| Analysis: | Three approaches were used: linkage disequilibrium single locus regression, combined linkage and linkage disequilibrium, and Bayes Cπ. |
| Software: | Qxpak, SAS, GenSel |
| Notes: | No statistics provided for Bayesian analysis, so that data was not curated |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li Y, Kim JJ |
| Affiliation: | School of Biotechnology, Yeungnam University, Gyeongsan 712-749, Korea |
| Title: | Multiple Linkage Disequilibrium Mapping Methods to Validate Additive Quantitative Trait Loci in Korean Native Cattle (Hanwoo) |
| Journal: | Asian-Australasian journal of animal sciences, 2015, 28(7): 926-35 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | LDVCM analysis |
User inputs on reference #26104396
Add your comments
Note similar findings
Note contradictions
|
