| QTL Map Information |
|---|
| Chromosome: | 8 |
| QTL Peak Location: | 66.89 (cM) |
| QTL Span: | 68.86-69.38 (cM)
60.7-61.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs41656491 |
| Peak: | |
| Lower, "Significant": | rs109113990 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.671 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were US Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for clinical mastitis. A total of 39,004 SNPs were used for analysis. |
| Analysis: | The single-step genomic BLUP approach was used. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Tiezzi F, Parker-Gaddis KL, Cole JB, Clay JS, Maltecca C |
| Affiliation: | Department of Animal Science, North Carolina State University, Raleigh, NC, 27695, United States of America |
| Title: | A genome-wide association study for clinical mastitis in first parity US Holstein cows using single-step approach and genomic matrix re-weighting procedure |
| Journal: | PloS one, 2015, 10(2): e0114919 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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