Release 56
(Apr 24, 2025)

QTL 9976 Description:

 Trait Information
Trait name: Shear force Vertebrate Trait Ontology: n/a
Reported name: Shear force Product Trait Ontology: Meat tenderness
Symbol: SF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:58.5 (cM)
QTL Span:32.30-32.50 (cM)
33.1-33.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:HGD (homogentisate 1,2-dioxygenase)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Red Cattle.
     Breeds associated:
    n/a
    Design:Animals were genotyped for 9 SNPs in HGD and analyzed for meat quality traits.
    Analysis:A linear model was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Zhou, G; Dudgeon, C; Li, M; Cao, Y; Zhang, L; Jin, H
    Affiliation:Branch of Animal Husbandry, Jilin Academy of Agricultural Sciences, 136100 Gongzhuling, People's Republic of China; khk1962@126.com
    Title:Molecular cloning of the HGD gene and association of SNPs with meat quality traits in Chinese red cattle.
    Journal:Molecular biology reports, 2009, 37(1): 603-11
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:HGD/EcoRV (g.42459A>G)
    User inputs on reference #19816789
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  • Cite this Data:

    Animal QTLdb: QTL9976 was published in 2009, and was curated into QTLdb on 2009-12-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:9976

     

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