| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
95.1-95.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs1095048823 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ACAN (aggrecan) |
| Cis/Trans acting type: |  |
| Links:
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Miniature horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP50 BeadChip and analyzed for dwarfism incidence. A total of 40,368 SNPs were used for analysis. |
| Analysis: | An association study with a Monte Carlo-based approach was used to compare differences in the occurrence of SNPs between case and control horses. |
| Software: | PLINK |
| Notes: | |
| Reference |
|---|
| Authors: | Eberth J E, Graves K T, MacLeod J N, Bailey E |
| Affiliation: | Department of Veterinary Science, MH Gluck Equine Research Center, University of Kentucky, Lexington, KY, 40546, USA |
| Title: | Multiple alleles of ACAN associated with chondrodysplastic dwarfism in Miniature horses |
| Journal: | Animal genetics, 2018, 49(5):413-20 |
| Links: |
PubMed | Abstract | List all data
|
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