Whole genome analysis for QTL/association enrichment
Running...
Version: Enrich S: beta v0.8
Data:
Number of behavior traits:
25
Number of QTL / associations found:
1,291
Number of chromosomes where QTL / associations are found:
29
Chi-squared (χ2) test: are behavior traits over-represented on some chromosomes?
Chromosomes
Total χ2
df
p-values
FDR *
Size of χ2
Chromosome Z
748.87225
28
1.146544e-139
2.557675e-139
Chromosome 1
2335.06500
28
9e-41
1.044000e-40
Chromosome 2
90520.21225
28
9e-41
1.044000e-40
Chromosome 3
102.08675
28
2.317909e-10
2.400691e-10
Chromosome 4
1986.98225
28
9e-41
1.044000e-40
Chromosome 5
13576.13775
28
9e-41
1.044000e-40
Chromosome 6
425.22775
28
1.427705e-72
2.300191e-72
Chromosome 7
667.75300
28
1.068581e-122
2.213489e-122
Chromosome 8
102.60950
28
1.904194e-10
2.045245e-10
Chromosome 9
62.11775
28
0.0002169463
2.169463e-04
Chromosome 10
236.40125
28
7.345133e-35
8.192648e-35
Chromosome 11
310.58800
28
1.927954e-49
2.795533e-49
Chromosome 12
557.83800
28
7.666584e-100
1.389568e-99
Chromosome 13
309.67775
28
2.926168e-49
4.040899e-49
Chromosome 14
921.91625
28
4.509671e-176
1.307805e-175
Chromosome 15
1015.17725
28
8.824295e-196
4.265076e-195
Chromosome 16
1063.49250
28
5.201682e-206
3.771219e-205
Chromosome 17
876.97050
28
1.356593e-166
3.576472e-166
Chromosome 18
365.66150
28
1.745073e-60
2.663532e-60
Chromosome 19
790.44850
28
2.165022e-148
5.232136e-148
Chromosome 20
967.98525
28
8.415818e-186
2.711764e-185
Chromosome 21
630.88225
28
5.194383e-115
1.004247e-114
Chromosome 22
967.98525
28
8.415818e-186
2.711764e-185
Chromosome 23
967.98525
28
8.415818e-186
2.711764e-185
Chromosome 24
456.69550
28
5.280139e-79
9.007296e-79
Chromosome 25
1063.49250
28
5.201682e-206
3.771219e-205
Chromosome 26
1015.17725
28
8.824295e-196
4.265076e-195
Chromosome 27
1063.49250
28
5.201682e-206
3.771219e-205
Chromosome 28
1063.49250
28
5.201682e-206
3.771219e-205
Chi-squared (χ2) test: Which of the 25 behavior traits are over-represented in the QTLdb
Traits
Total χ2
df
p-values
FDR *
Size of χ2
Aggressive behavior
200.90747
24
6.978368e-30
8.722960e-29
Broody frequency
49.20955
24
0.001782749
6.366961e-03
Complex environment test
21.68808
24
0.597878
9.964633e-01
Contrafreeloading
15.34176
24
0.9103591
9.999750e-01
Distance traveled during open field test
13.69939
24
0.953151
9.999750e-01
Duration of broodiness
49.47307
24
0.001651415
6.366961e-03
Factor Fear
19.84344
24
0.7056437
9.999750e-01
Fear-call latency
30.81786
24
0.1591041
3.977602e-01
Fear-headflicks
17.4993
24
0.8266006
9.999750e-01
Fear-related behavior
22.82693
24
0.5300333
9.964633e-01
Fear-restraint test
29.88292
24
0.1886626
4.287786e-01
Fear-stand latency
9.33242
24
0.9967967
9.999750e-01
Fear-tonic immobility attempts
34.93943
24
0.06930403
2.165751e-01
Fear-tonic immobility duration
109.86798
24
5.946601e-13
3.716626e-12
Fear-walk latency
5.36934
24
0.999975
9.999750e-01
Feather pecking
22.28579
24
0.5622135
9.964633e-01
Frequency of calling
22.90733
24
0.5252741
9.964633e-01
Frequency of defecation
60.47617
24
5.470013e-05
2.735006e-04
Mirror test
10.84402
24
0.9900816
9.999750e-01
Movement latency during open field test
7.6182
24
0.9993959
9.999750e-01
Receiving feather pecking
149.36023
24
4.355146e-20
3.629288e-19
Response to novel food
10.84402
24
0.9900816
9.999750e-01
Resting time during open field test
11.41344
24
0.9857452
9.999750e-01
Social tendency
1289.99998
24
1.554258e-257
3.885645e-256
Speed of movement during open field test
34.24039
24
0.0804865
2.235736e-01
Correlations found between some of these traits for your reference
No correlation data found on these traits
Overall Test
Data
Chi'Square Test
Fisher's Exact Test
Number of chrom.:
29
χ2
=
125172.424000
Number of traits:
25
df
=
672
Number of QTLs:
1,291
p-value
=
0
FOOT NOTE: * : FDR is short for "false
discovery rate", representing the expected proportion of type I errors. A type I
error is where you incorrectly reject the null hypothesis, i.e. you get a false
positive. It's statistical definition is FDR = E(V/R | R > 0) P(R > 0), where
V = Number of Type I errors (false positives); R = Number of rejected hypotheses.
Benjamini–Hochberg procedure is a practical way to estimate FDR.
Running...
