Whole genome analysis for QTL/association enrichment
Running...
Version: Enrich S: beta v0.8
Data:
Number of exterior features traits:
16
Number of QTL / associations found:
1,031
Number of chromosomes where QTL / associations are found:
23
Chi-squared (χ2) test: are exterior features traits over-represented on some chromosomes?
Chromosomes
Total χ2
df
p-values
FDR *
Size of χ2
Chromosome Z
624.42976
22
6.3924e-118
1.050180e-117
Chromosome 1
19240.48416
22
9e-41
9.409091e-41
Chromosome 2
594.92832
22
1.005400e-111
1.360247e-111
Chromosome 3
538.06704
22
8.220797e-100
1.050435e-99
Chromosome 4
65743.94880
22
9e-41
9.409091e-41
Chromosome 5
510.70720
22
4.268501e-94
5.167133e-94
Chromosome 6
8594.61792
22
9e-41
9.409091e-41
Chromosome 7
594.92832
22
1.005400e-111
1.360247e-111
Chromosome 8
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 9
594.92832
22
1.005400e-111
1.360247e-111
Chromosome 12
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 13
624.42976
22
6.3924e-118
1.050180e-117
Chromosome 14
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 15
654.64512
22
2.812204e-124
5.880063e-124
Chromosome 16
654.64512
22
2.812204e-124
5.880063e-124
Chromosome 17
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 19
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 24
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 25
654.64512
22
2.812204e-124
5.880063e-124
Chromosome 26
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 27
624.42976
22
6.3924e-118
1.050180e-117
Chromosome 28
685.57440
22
8.564707e-131
2.462353e-130
Chromosome 33
58.71888
22
3.45059e-05
3.450590e-05
Chi-squared (χ2) test: Which of the 16 exterior features traits are over-represented in the QTLdb
Traits
Total χ2
df
p-values
FDR *
Size of χ2
Comb area
439.37408
15
3.578565e-84
1.145141e-83
Comb height
190.33951
15
1.935458e-32
2.382102e-32
Comb length
241.41249
15
7.259083e-43
1.161453e-42
Comb shape
255.75001
15
8.110227e-46
1.441818e-45
Comb weight
162.26845
15
8.65608e-27
9.892663e-27
Comb width
203.34512
15
4.438611e-35
5.918148e-35
Feather density
369.94637
15
1.401809e-69
3.738157e-69
Feather length, back
283.38888
15
1.565990e-51
3.131980e-51
Feather length, tail
217.60321
15
5.502355e-38
8.003425e-38
Feather length, wing
128.73602
15
3.758123e-20
4.008665e-20
Feather tract width, breast
105.57095
15
1.136540e-15
1.136540e-15
Feather-crested head
642.37501
15
3.472867e-127
1.389147e-126
Feathered feet
726.29168
15
4.61298e-145
3.690384e-144
Frizzle feather
999.00002
15
2.207633e-203
3.532213e-202
Wattles length
685.33334
15
2.480749e-136
1.323066e-135
Wattles weight
339.66668
15
3.035132e-63
6.937445e-63
Correlations found between some of these traits for your reference
No correlation data found on these traits
Overall Test
Data
Chi'Square Test
Fisher's Exact Test
Number of chrom.:
23
χ2
=
105793.148800
Number of traits:
16
df
=
330
Number of QTLs:
1,031
p-value
=
0
FOOT NOTE: * : FDR is short for "false
discovery rate", representing the expected proportion of type I errors. A type I
error is where you incorrectly reject the null hypothesis, i.e. you get a false
positive. It's statistical definition is FDR = E(V/R | R > 0) P(R > 0), where
V = Number of Type I errors (false positives); R = Number of rejected hypotheses.
Benjamini–Hochberg procedure is a practical way to estimate FDR.
Running...
