| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
73.7-73.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs734607020 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | RBPJ (recombination signal binding protein for immunoglobulin kappa J region) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were Dongxiang blue-shelled and White Leghorn chickens. |
| Breeds associated:
n/a
|
| Design: | Genotyping by genome reducing and sequencing was used to detect genome-wide SNPs for association analysis for growth and egg traits. A total of 156,575 SNPs were used for analysis. |
| Analysis: | Association analysis was performed using the Efficient Mixed-Model Association eXpedited (EMMAX) method. |
| Software: | SAMtools |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liao R, Zhang X, Chen Q, Wang Z, Wang Q, Yang C, Pan Y |
| Affiliation: | Shanghai Key Laboratory of Veterinary Biotechnology, Shanghai, 200240, China |
| Title: | Genome-wide association study reveals novel variants for growth and egg traits in Dongxiang blue-shelled and White Leghorn chickens |
| Journal: | Animal genetics, 2016, 47(5): 588-96 |
| Links: |
PubMed | Abstract | List all data
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