Release 56
(Apr 24, 2025)

QTL 19361 Description:

 Trait Information
Trait name: Shank length Vertebrate Trait Ontology: Tarsometatarsus length
Reported name: Shank length Product Trait Ontology: n/a
Symbol: SHKLN Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:0.00 (cM)
QTL Span:n/a
102.5-102.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs16084214
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.038
Dominance effect:n/a
Additive effect:n/a
Associated Gene:ROCK1 (Rho-associated, coiled-coil containing protein kinase 1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Birds were from an F2 resource population made up of a reciprocal cross between Silkie fowl and Cornish broilers.
     Breeds associated:
    Design:Birds were genotyped for 124 SNP in Wnt pathway genes and analyzed for carcass traits.
    Analysis:Analysis was performed with a least-squares method using a mixed linear model.
    Software:Haploview, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Lu Y, Chen SR, Liu WB, Hou ZC, Xu GY, Yang N
    Affiliation:National Engineering Laboratory for Animal Breeding and MOA Key Laboratory of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China
    Title:Polymorphisms in Wnt signaling pathway genes are significantly associated with chicken carcass traits
    Journal:Poultry Sci, 2012, 1299-307
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22582286
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  • Cite this Data:

    Animal QTLdb: QTL19361 was published in 2012, and was curated into QTLdb on 2013-01-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:19361

     

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