Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 9409 Description:

 Trait Information
Trait name: Shank length Vertebrate Trait Ontology: Tarsometatarsus length
Reported name: Shank length Product Trait Ontology: n/a
Symbol: SHKLN Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:331.7 (cM)
QTL Span:23.9-380.6 (cM)
8.3-131.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat8.7
VARIANCE1.1
Dominance effect:n/a
Additive effect:0.85
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #9409
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  •  QTL Experiment in Brief
    Animals:Birds were from a cross between high-growth and low-growth lines.
     Breeds associated:
    n/a
    Design:Birds were genotyped for 129 microsatellite markers and analyzed for metabolism and growth traits.
    Analysis:Interval mapping was performed using regression methods.
    Software:CRIMAP, SAS, QTL Express, QTLMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Nadaf J, Pitel F, Gilbert H, Duclos MJ, Vignoles F, Beaumont C, Vignal A, Porter TE, Cogburn LA, Aggrey SE, Simon J, Le Bihan-Duval E.
    Affiliation:INRA, UR83, Recherches Avicoles, 37380 Nouzilly, France; elisabeth.lebihan@tours.inra.fr
    Title:QTL for several metabolic traits map to loci controlling growth and body composition in an F2 intercross between high- and low-growth chicken lines.
    Journal:Physiol Genomics, 2009, 38(3): 241-9
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #19531576
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  • Cite this Data:

    Animal QTLdb: QTL9409 was published in 2009, and was curated into QTLdb on 2011-03-03. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:9409

     

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