| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
25.1-25.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs425400296 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a resource population of female Sarda sheep. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip, and GWAS were performed for traits related to M. paratuberculosis susceptibility. A total of 43,390 SNPs were used for analysis. |
| Analysis: | Combined linkage disequilibrium linkage analysis was used. |
| Software: | SAMtools v1.6, GATK v4.0.11.0, AIREMLF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Usai MG, Casu S, Sechi T, Salaris SL, Miari S, Mulas G, Cancedda MG, Ligios C, Carta A |
| Affiliation: | Research Unit Genetics and Biotechnology - Agris Sardegna, 07100, Sassari, Italy |
| Title: | Advances in understanding the genetic architecture of antibody response to paratuberculosis in sheep by heritability estimate and LDLA mapping analyses and investigation of candidate regions using sequence-based data |
| Journal: | Genetics, Selection, Evolution : GSE, 2024, 56(1): 5 |
| Links: |
PubMed | Abstract | List all data
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