| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 11.78 (cM) |
| QTL Span: | 11.78-11.78 (cM)
9.4-9.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80801891 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 4.38 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #106371
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Laiwu pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for body conformation traits. A total of 46,916 SNPs were used for analysis. |
| Analysis: | A generalized linear mixed model was used. |
| Software: | PLINK, SAS, GenABEL in R, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhou L, Ji J, Peng S, Zhang Z, Fang S, Li L, Zhu Y, Huang L, Chen C, Ma J |
| Affiliation: | National Key Laboratory for Swine Genetics, Breeding and Production Technology, Jiangxi Agricultural University, Nanchang, 330045, China |
| Title: | A GWA study reveals genetic loci for body conformation traits in Chinese Laiwu pigs and its implications for human BMI |
| Journal: | Mammalian genome , 2016, 27(11-12):610-621 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #27473603
Add your comments
Note similar findings
Note contradictions
|
