| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
96.9-97.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs327044255 |
| Peak: | |
| Lower, "Significant": | rs325043270 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #211959
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Yorkshire and Landrace pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using two methods, RAD-seq and the Geneseek Porcine 50K SNP chip (both imputed to sequence level), and analyzed for birth weight. |
| Analysis: | GWAS was performed using a mixed model including a random polygenic effect. |
| Software: | Beagle, PLINK, EMMAX, BayesFM-MCMC |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li Y, Li B, Yang M, Han H, Chen T, Wei Q, Miao Z, Yin L, Wang R, Shen J, Li X, Xu X, Fang M, Zhao S |
| Affiliation: | Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, The Cooperative Innovation Center for Sustainable Pig Production, Ministry of Education, Huazhong Agricultural University, Wuhan, China |
| Title: | Genome-Wide Association Study and Fine Mapping Reveals Candidate Genes for Birth Weight of Yorkshire and Landrace Pigs. |
| Journal: | Front Genet, 2020, 11:183 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #32292414
Add your comments
Note similar findings
Note contradictions
|
