| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
86.5-86.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
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FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | AHR (aryl hydrocarbon receptor) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Meishan, Duroc, Yorkshire, and Landrace pigs. |
| Breeds associated:
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| Design: | Next-generation sequencing was used to identify CNV regions. Association analysis was performed to identify CNV associated with reproductive traits. |
| Analysis: | Mixed models were used. |
| Software: | CNVnator, CNVcaller, SAS v9.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zheng X, Zhao P, Yang K, Ning C, Wang H, Zhou L, Liu J |
| Affiliation: | 1National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193 China |
| Title: | CNV analysis of Meishan pig by next-generation sequencing and effects of AHR gene CNV on pig reproductive traits |
| Journal: | Journal of animal science and biotechnology, 2020, 11: 42 |
| Links: |
PubMed | Abstract | List all data
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