| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
130.4-130.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80945185 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 0.019 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CCN1 (cellular communication network factor 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #283447
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were free-range Iberian pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped for 50 selected SNPs, and association analyses were performed for intramuscular fat content and fatty acid composition. |
| Analysis: | A univariate animal model was used. |
| Software: | GATK, Haploview v4.2, Qxpak 5.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Palma-Granados P, García-Casco JM, Caraballo C, Vázquez-Ortego P, Gómez-Carballar F, Sánchez-Esquiliche F, Óvilo C, Muñoz M |
| Affiliation: | Centro de I+D en Cerdo Ibérico, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CSIC), Ctra. EX101 km 4,7, 06300 Zafra, Spain |
| Title: | Design of a low-density SNP panel for intramuscular fat content and fatty acid composition of backfat in free-range Iberian pigs |
| Journal: | Journal of animal science, 2023, 101:skad079 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #36930061
Add your comments
Note similar findings
Note contradictions
|
