| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
18.5-18.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.03212% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs from Danish and American lines. |
| Breeds associated:
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| Design: | Pigs were genotyped using the GeneSeek GGP 50k SNP array and GWAS were performed for semen traits. A total of 28,289 SNPs were used for analysis. |
| Analysis: | Weighted single-step GWAS was performed using a repeatability model. |
| Software: | PLINK, Beagle |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gao N, Chen Y, Liu X, Zhao Y, Zhu L, Liu A, Jiang W, Peng X, Zhang C, Tang Z, Li X, Chen Y |
| Affiliation: | State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, North Third Road, Guangzhou Higher Education Mega Center, Guangzhou, 510006, China |
| Title: | Weighted single-step GWAS identified candidate genes associated with semen traits in a Duroc boar population |
| Journal: | BMC Genomics, 2019, 20(1): 797 |
| Links: |
PubMed | Abstract | List all data
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