| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
60.3-60.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs332244679 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.389E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White pigs. |
| Breeds associated:
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| Design: | Pigs were genotyped using the Affymetrix Wens 55K SNP Chip and GWAS were performed for reproductive traits. A total of 39,580 SNPs were used for analysis. |
| Analysis: | Univariate linear mixed models were used. |
| Software: | GCTA v1.93.2 beta, PopLDdecay, PLINK 1.90, GEMMA v0.98.5, CMplot in R v4.3.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hong Y, Tan C, He X, Wu D, Zhang Y, Song C, Wu Z |
| Affiliation: | College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou 510642, China |
| Title: | Genome-Wide Association Study of Reproductive Traits in Large White Pigs |
| Journal: | Animals : an open access journal from MDPI, 2024, 14(19):2874 |
| Links: |
PubMed | Abstract | List all data
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