| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
23.9-23.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81451913 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.10E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Yorkshire pigs. |
| Breeds associated:
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| Design: | Pigs were genotyped using the GeneSeek-Neogen Porcine SNP60 BeadChip and GWAS were performed for reproduction traits. A total of 49,284 SNPs were used for analysis. |
| Analysis: | GWAS was performed using the fixed and random model circulating probability unification (FarmCPU) method. |
| Software: | GCTA v1.94.0, , PLINK v1.9, R software v4.0.2, GAPIT v3.0, rMVP, CMplot |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang L, Zhang S, Yuan M, Zhan F, Song M, Shang P, Yang F, Li X, Qiao R, Han X, Li X, Fang M, Wang K |
| Affiliation: | College of Animal Science and Technology, Henan Agricultural University, Zhengzhou 450002, China |
| Title: | Genome-Wide Association Studies and Runs of Homozygosity to Identify Reproduction-Related Genes in Yorkshire Pig Population |
| Journal: | Genes, 2023, 14(12):2133 |
| Links: |
PubMed | Abstract | List all data
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