| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
44.8-44.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81297790 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Dongliao Black pigs. |
| Breeds associated:
n/a
|
| Design: | Pigs were genotyped using the PorcineSNP50 Genotyping BeadChip and GWAS were performed for litter traits. A total of 35,065 SNPs were used for analysis. |
| Analysis: | GWAS were carried out using three methods: Bayesian information and linkage disequilibrium iteratively nested keyway (BLINK), fixed and random model circulating probability unification (FarmCPU), and mixed linear model (MLM). |
| Software: | GAPIT v.3, Beagle v5.2, PLINK, DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sun H, Cheng Y, He Y, Cheng C, Zhao H, Yang S, Wei M, Yang J, Liang S, Bai C, Sun B |
| Affiliation: | College of Animal Science, Jilin University, Changchun, China |
| Title: | Genome-wide association studies for the number of piglets born alive and dead in Dongliao black pigs |
| Journal: | Animal Genetics, 2024, 55(2): 282-285 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | BLINK |
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