A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RFK   ENSSSCG00000005276 1:239756838-239762876   FP086614,CH242-362F2,1:239726310-239776975
(Clone quality: bE362F2 on chr=1; Num_of_Contigs=4; )
RFTN1   ENSSSCG00000011198 13:2915982-2975861    
RFTN2   ENSSSCG00000016080 15:95012052-95051244    
RFWD2   ENSSSCG00000015509 9:110873524-111071949    
RFWD3   ENSSSCG00000002715 6:9372324-9412578    
RFX1 ENSSSCG00000013764 2:56964182-56987914   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
RFX1 location ⇒ 2:56966058-56965906   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
RFX1 location ⇒ 2:56968029-56967915   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
RFX1 location ⇒ 2:56968229-56968109   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
RFX1 location ⇒ 2:56968577-56968460   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
RFX3 ENSSSCG00000005225 1:228683938-228800318    
RFX3 location ⇒ 1:228716751-228716600   CU633274,CH242-325E1,1:228681809-228778572
(Clone quality: bE325E1 on chr=1; Num_of_Contigs=2; )
RFX3 location ⇒ 1:228723358-228723206   CU633274,CH242-325E1,1:228681809-228778572
(Clone quality: bE325E1 on chr=1; Num_of_Contigs=2; )
RFX3 location ⇒ 1:228727309-228727210   CU633274,CH242-325E1,1:228681809-228778572
(Clone quality: bE325E1 on chr=1; Num_of_Contigs=2; )
RFX3 location ⇒ 1:228731435-228731293   CU633274,CH242-325E1,1:228681809-228778572
(Clone quality: bE325E1 on chr=1; Num_of_Contigs=2; )
RFX4 ENSSSCG00000000168 5:11800623-11894144    
RFX4 location ⇒ 5:11855471-11855331   CU407137,CH242-124C18,5:11837811-11950303
(Clone quality: bE124C18 on chr=5; Num_of_Contigs=5; )
RFX4 location ⇒ 5:11862276-11862195   CU407137,CH242-124C18,5:11837811-11950303
(Clone quality: bE124C18 on chr=5; Num_of_Contigs=5; )
RFX4 location ⇒ 5:11864725-11864509   CU407137,CH242-124C18,5:11837811-11950303
(Clone quality: bE124C18 on chr=5; Num_of_Contigs=5; )
RFX4 location ⇒ 5:11866754-11866589   CU407137,CH242-124C18,5:11837811-11950303
(Clone quality: bE124C18 on chr=5; Num_of_Contigs=5; )
RFX5 ENSSSCG00000006625 4:101856732-101861445 CU179724,CH242-246E20,4:101737894-101911024
(Clone quality: bE246E20 on chr=4; Num_of_Contigs=5; ) 		 
RFX5 location ⇒ 4:101861655-101860825 CU179724,CH242-246E20,4:101737894-101911024
(Clone quality: bE246E20 on chr=4; Num_of_Contigs=5; ) 		 
RFX6   ENSSSCG00000004258 1:46754524-46810619    
RFX7   ENSSSCG00000004603 1:120514815-120525854   CU480753,CH242-167K13,1:120505380-120658514
(Clone quality: bE167K13 on chr=1; Num_of_Contigs=4; )
RFX8   ENSSSCG00000008165 3:48504604-48572483   CU463188,CH242-163A11,3:48487582-48648441
(Clone quality: bE163A11 on chr=3; Num_of_Contigs=2; )
RFXANK ENSSSCG00000014070 2:71568269-71581131    
RFXAP ENSSSCG00000009356 11:12148387-12152928   CU606927,CH242-319N3,11:12140598-12169931
(Clone quality: bE319N3 on chr=11; Num_of_Contigs=4; )
RFXAP location ⇒ 11:1500342-1500419   CU929510,CH242-273A16,11:1455054-1520978
(Clone quality: bE273A16 on chr=11; Num_of_Contigs=4; )
RFXAP location ⇒ 11:1719984-1720061   CU062605,CH242-86L16,11:1712947-1720194
(Clone quality: bE86L16 on chr=11; Num_of_Contigs=9; )
RFXAP location ⇒ 11:49298-49229   CU633734,CH242-95K24,11:42721-57888
(Clone quality: bE95K24 on chr=11; Num_of_Contigs=14; )
RFXAP location ⇒ 11:605358-605289   CU074388,CH242-102K23,11:602958-722267
(Clone quality: bE102K23 on chr=11; Num_of_Contigs=8; )
RG9MTD1   ENSSSCG00000011956 13:115669470-115670717   CU633680,CH242-251F9,13:115560062-115745735
(Clone quality: bE251F9 on chr=13; Num_of_Contigs=2; )
RG9MTD2   ENSSSCG00000009183 8:103718951-103747702    
RG9MTD3   ENSSSCG00000005354 1:249919647-249938453   CU062410,CH242-117J8,1:249873492-249994741
(Clone quality: bE117J8 on chr=1; Num_of_Contigs=2; )
RGC32 ENSSSCG00000009434 11:24448858-24448989   CU424441,CH242-487M5,11:24447326-24449542
(Clone quality: bE487M5 on chr=11; Num_of_Contigs=11; )
RGC32 location ⇒ 11:24445133-24445499   CU424441,CH242-487M5,11:24444057-24447225
(Clone quality: bE487M5 on chr=11; Num_of_Contigs=11; )
RGC32 location ⇒ 11:24448857-24448964   CU424441,CH242-487M5,11:24447326-24449542
(Clone quality: bE487M5 on chr=11; Num_of_Contigs=11; )
RGL1   ENSSSCG00000015563 9:117466795-117600626    
RGL2   ENSSSCG00000001506 7:34062888-34069737 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
RGL3   ENSSSCG00000013625 2:52375189-52388345   CU855518,CH242-272A5,2:52374247-52417356
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
RGMA   ENSSSCG00000002267 7:96326725-96352364   CT954235,CH242-523F15,7:96191580-96374539
(Clone quality: bE523F15 on chr=7; Num_of_Contigs=1; )
RGMB ENSSSCG00000014176 2:94161481-94182126   CU928692,CH242-242E7,2:94148116-94268752
(Clone quality: bE242E7 on chr=2; Num_of_Contigs=5; )
RGMB location ⇒ 2:94167132-94167415   CU928692,CH242-242E7,2:94148116-94268752
(Clone quality: bE242E7 on chr=2; Num_of_Contigs=5; )
RGMB location ⇒ 2:94181151-94181614   CU928692,CH242-242E7,2:94148116-94268752
(Clone quality: bE242E7 on chr=2; Num_of_Contigs=5; )
RGN   ENSSSCG00000012268 X:41704846-41726575    
RGP1   ENSSSCG00000005320 1:247560788-247565099   CU062658,CH242-97C14,1:247546808-247583035
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
RGR   ENSSSCG00000010350 14:88931225-88941989   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
RGS10   ENSSSCG00000010684 14:135369917-135407008   CT867965,CH242-302P15,14:135234249-135430148
(Clone quality: bE302P15 on chr=14; Num_of_Contigs=1; )
RGS11   ENSSSCG00000010846 10:12207208-12322352    
RGS12   ENSSSCG00000008698 8:1293470-1370923    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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