A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
E2F1 ENSSSCG00000007268 17:39098043-39102652    
E2F1 location ⇒ 17:39098459-39098052   CU075927,CH242-92I13,17:39097105-39099692
(Clone quality: bE92I13 on chr=17; Num_of_Contigs=16; )
E2F1 location ⇒ 17:39098826-39098599   CU075927,CH242-92I13,17:39097105-39099692
(Clone quality: bE92I13 on chr=17; Num_of_Contigs=16; )
E2F3   ENSSSCG00000001079 7:16566389-16576110   CT841541,CH242-229C6,7:16517258-16703348
(Clone quality: bE229C6 on chr=7; Num_of_Contigs=1; )
E2F4   ENSSSCG00000002787 6:13351207-13357816   CU929920,CH242-351A16,6:13336930-13369049
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
E2F5   ENSSSCG00000006145 4:53323245-53357165    
E2F6   ENSSSCG00000008628 3:116096348-116102210   FP236381,CH242-42I23,3:116094505-116102221
(Clone quality: bE42I23 on chr=3; Num_of_Contigs=21; )
E2F7   ENSSSCG00000000950 5:97199212-97231817   CU407325,CH242-110N8,5:97128895-97250629
(Clone quality: bE110N8 on chr=5; Num_of_Contigs=3; )
E2F8   ENSSSCG00000013352 2:37381888-37396811    
E4F1   ENSSSCG00000008047 3:36576839-36586810   FP102909,CH242-324F20,3:36575838-36587274
(Clone quality: bE324F20 on chr=3; Num_of_Contigs=11; )
EAF1   ENSSSCG00000011189 13:2006300-2018331    
EAF2   ENSSSCG00000011880 13:104173775-104216737    
EAPP   ENSSSCG00000001960 7:70907585-70921209   CT867954,CH242-216K6,7:70902504-70936968
(Clone quality: bE216K6 on chr=7; Num_of_Contigs=4; )
EARS2   ENSSSCG00000010797 10:86465-113595    
EBAG9 location ⇒ 4:27692625-27692518   CU468453,CH242-166J3,4:27595829-27725057
(Clone quality: bE166J3 on chr=4; Num_of_Contigs=4; )
EBAG9 location ⇒ 4:27694933-27694773   CU468453,CH242-166J3,4:27595829-27725057
(Clone quality: bE166J3 on chr=4; Num_of_Contigs=4; )
EBAG9 location ⇒ 4:27698748-27698647   CU468453,CH242-166J3,4:27595829-27725057
(Clone quality: bE166J3 on chr=4; Num_of_Contigs=4; )
EBAG9 location ⇒ 4:27834333-27834493   CU695163,CH242-145J23,4:27819164-27860464
(Clone quality: bE145J23 on chr=4; Num_of_Contigs=5; )
EBF ENSSSCG00000017046 16:62297479-62430070    
EBF ENSSSCG00000007171 17:34450799-34506724    
EBF ENSSSCG00000002838 6:24008994-24019392    
EBF ENSSSCG00000010757 14:146069377-146182495    
EBF1 ENSSSCG00000017046 16:62297479-62430070    
EBF1 location ⇒ 16:62051124-62051283   FP016137,CH242-33J23,16:62049435-62051700
(Clone quality: bE33J23 on chr=16; Num_of_Contigs=4; )
EBF1 location ⇒ 16:62073675-62073747   FP016137,CH242-33J23,16:62051801-62094746
(Clone quality: bE33J23 on chr=16; Num_of_Contigs=4; )
EBF1 location ⇒ 16:62297495-62297582   CU464052,CH242-424P9,16:62294352-62379674
(Clone quality: bE424P9 on chr=16; Num_of_Contigs=2; )
EBF1 location ⇒ 16:62313197-62313340   CU464052,CH242-424P9,16:62294352-62379674
(Clone quality: bE424P9 on chr=16; Num_of_Contigs=2; )
EBF2 location ⇒ 14:9937481-9937826   CT955976,CH242-522M18,14:9818170-10028457
(Clone quality: bE522M18 on chr=14; Num_of_Contigs=1; )
EBF3 ENSSSCG00000010757 14:146069377-146182495    
EBF4   ENSSSCG00000007171 17:34450799-34506724    
EBI2 ENSSSCG00000009517 11:69203947-69204909   CU972472,CH242-117F14,11:69198433-69208363
(Clone quality: bE117F14 on chr=11; Num_of_Contigs=6; )
EBI2 location ⇒ 11:17632460-17632407   CU062573,CH242-415L14,11:17628495-17647998
(Clone quality: bE415L14 on chr=11; Num_of_Contigs=7; )
EBI2 location ⇒ 11:20669643-20669582   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
EBI2 location ⇒ 11:53484256-53484182   CT956021,CH242-409E19,11:53464271-53494290
(Clone quality: bE409E19 on chr=11; Num_of_Contigs=1; )
EBI2 location ⇒ 11:64413292-64413200   CU633813,CH242-267B4,11:64380989-64418055
(Clone quality: bE267B4 on chr=11; Num_of_Contigs=16; )
EBI3 ENSSSCG00000013498 2:48412315-48421139   CU929466,CH242-60A20,2:48379010-48440195
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
EBI3 ENSSSCG00000014016 2:68101464-68112459 CU639394,CH242-198P20,2:67907486-68117033
(Clone quality: bE198P20 on chr=2; Num_of_Contigs=3; ) 		 
EBI3 location ⇒ 2:48412974-48413100   CU929466,CH242-60A20,2:48379010-48440195
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
EBI3 location ⇒ 2:48414814-48414995   CU929466,CH242-60A20,2:48379010-48440195
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
EBI3 location ⇒ 2:48417613-48417773   CU929466,CH242-60A20,2:48379010-48440195
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
EBI3 location ⇒ 2:48420707-48420863   CU929466,CH242-60A20,2:48379010-48440195
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
EBP ENSSSCG00000002033 7:82306050-82307480   CU468526,CH242-14D10,7:82261915-82310389
(Clone quality: bE14D10 on chr=7; Num_of_Contigs=8; )
EBP ENSSSCG00000006276 4:82893775-82894545   CU468820,CH242-166J20,4:82887998-82899500
(Clone quality: bE166J20 on chr=4; Num_of_Contigs=10; )
EBP ENSSSCG00000009018 8:66913895-66979740    
EBP ENSSSCG00000002867 6:28896258-28896713   CU929902,CH242-260F18,6:28809182-28963405
(Clone quality: bE260F18 on chr=6; Num_of_Contigs=2; )
ECD   ENSSSCG00000010295 14:79225483-79259238   CU467934,CH242-61A5,14:79214327-79266931
(Clone quality: bE61A5 on chr=14; Num_of_Contigs=7; )
ECE1 ENSSSCG00000003513 6:54779747-54835903    
ECEL1   ENSSSCG00000016285 15:125282531-125289804   FP101964,CH242-326G13,15:125261210-125299035
(Clone quality: bE326G13 on chr=15; Num_of_Contigs=8; )
ECHDC1   ENSSSCG00000004216 1:37471136-37515979   CU856007,CH242-209H2,1:37376899-37520361
(Clone quality: bE209H2 on chr=1; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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