A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
UBP location ⇒ 5:66014791-66014621   CU914454,CH242-45H20,5:66014079-66022901
(Clone quality: bE45H20 on chr=5; Num_of_Contigs=14; )
UBP location ⇒ 5:66044004-66044103   CU914454,CH242-45H20,5:66043936-66047770
(Clone quality: bE45H20 on chr=5; Num_of_Contigs=14; )
UBP1   ENSSSCG00000011235 13:16178022-16222958    
UBQLN3   ENSSSCG00000014691 9:3537888-3539846   CU928707,CH242-512A10,9:3536682-3542436
(Clone quality: bE512A10 on chr=9; Num_of_Contigs=4; )
UBQLN4   ENSSSCG00000006500 4:97922738-97939650    
UBQLNL   ENSSSCG00000014690 9:3533358-3535199   CU928707,CH242-512A10,9:3529288-3536581
(Clone quality: bE512A10 on chr=9; Num_of_Contigs=4; )
UBR1   ENSSSCG00000004717 1:134517219-134599326    
UBR2   ENSSSCG00000001641 7:43401505-43630342    
UBR3   ENSSSCG00000015939 15:71579984-71648113    
UBR4   ENSSSCG00000003488 6:53149584-53195373    
UBR7   ENSSSCG00000002460 7:122809305-122826265 CT737384,CH242-22E21,7:122753757-122927074
(Clone quality: bE22E21 on chr=7; Num_of_Contigs=2; ) 		 
UBTD1   ENSSSCG00000010521 14:113730009-113785397   CU407093,CH242-523G22,14:113665116-113843304
(Clone quality: bE523G22 on chr=14; Num_of_Contigs=4; )
UBTD2 ENSSSCG00000016994 16:49319605-49383853    
UBTF   ENSSSCG00000017360 12:16936904-16948100    
UBXD8 ENSSSCG00000014057 2:70423348-70472952 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
UBXD8 location ⇒ 2:70434677-70434568 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
UBXD8 location ⇒ 2:70437410-70437318 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
UBXD8 location ⇒ 2:70439438-70439297 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
UBXD8 location ⇒ 2:70443891-70443754 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
UBXN10   ENSSSCG00000003498 6:53905930-53906772   FP236206,CH242-163P14,6:53892728-53945570
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
UBXN2B   ENSSSCG00000006239 4:77240455-77268205    
UBXN4   ENSSSCG00000015690 15:14422370-14458242   CU856241,CH242-144P8,15:14422074-14478515
(Clone quality: bE144P8 on chr=15; Num_of_Contigs=4; )
UBXN6   ENSSSCG00000013510 2:48650783-48664306    
UBXN8   ENSSSCG00000015843 15:51273313-51298226   CU855604,CH242-134L11,15:51228220-51331802
(Clone quality: bE134L11 on chr=15; Num_of_Contigs=7; )
UCHL3   ENSSSCG00000009466 11:46784189-46822736    
UCHL5 ENSSSCG00000010802 10:1651199-1667766   CU929655,CH242-497M20,10:1649932-1676227
(Clone quality: bE497M20 on chr=10; Num_of_Contigs=12; )
UCHL5 location ⇒ 10:1651774-1651102   CU929655,CH242-497M20,10:1649932-1676227
(Clone quality: bE497M20 on chr=10; Num_of_Contigs=12; )
UCHL5 location ⇒ 10:1667365-1667231   CU929655,CH242-497M20,10:1649932-1676227
(Clone quality: bE497M20 on chr=10; Num_of_Contigs=12; )
UCHL5 location ⇒ 10:1731737-1732409   CU896682,CH242-7K9,10:1723780-1745502
(Clone quality: bE7K9 on chr=10; Num_of_Contigs=6; )
UCHL5 location ⇒ 10:1753027-1752893   CU896682,CH242-7K9,10:1745603-1759232
(Clone quality: bE7K9 on chr=10; Num_of_Contigs=6; )
UCK1   ENSSSCG00000005717 1:286847398-286852432 CU914430,CH242-421J21,1:286815524-286859256
(Clone quality: bE421J21 on chr=1; Num_of_Contigs=8; ) 		 
UCK2 ENSSSCG00000006322 4:88278755-88355628    
UCK2 location ⇒ 4:88177925-88178215   CU633168,CH242-13N16,4:88146409-88191681
(Clone quality: bE13N16 on chr=4; Num_of_Contigs=7; )
UCK2 location ⇒ 4:88290360-88290217   CU633168,CH242-13N16,4:88274897-88300496
(Clone quality: bE13N16 on chr=4; Num_of_Contigs=7; )
UCK2 location ⇒ 4:88298420-88298259   CU633168,CH242-13N16,4:88274897-88300496
(Clone quality: bE13N16 on chr=4; Num_of_Contigs=7; )
UCK2 location ⇒ 4:88355603-88355313   CU468989,CH242-231O3,4:88300497-88387293
(Clone quality: bE231O3 on chr=4; Num_of_Contigs=3; )
UCN ENSSSCG00000011143 10:61762986-61763483   FP016037,CH242-134E10,10:61759415-61783112
(Clone quality: bE134E10 on chr=10; Num_of_Contigs=5; )
UCN ENSSSCG00000011354 13:26163809-26164138   CU633242,CH242-208G16,13:26093504-26215489
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
UCN2   ENSSSCG00000011354 13:26163809-26164138   CU633242,CH242-208G16,13:26093504-26215489
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
UCN3   ENSSSCG00000011143 10:61762986-61763483   FP016037,CH242-134E10,10:61759415-61783112
(Clone quality: bE134E10 on chr=10; Num_of_Contigs=5; )
UCP2 ENSSSCG00000014833 9:8041044-8048070   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
UCP2 location ⇒ 9:8041464-8041065   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
UCP2 location ⇒ 9:8042718-8042523   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
UCP2 location ⇒ 9:8043702-8043487   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
UCP2 location ⇒ 9:8044291-8044065   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
UCP3   ENSSSCG00000014834 9:8061601-8068728   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
UEVLD   ENSSSCG00000013362 2:37790145-37960742    
UF ENSSSCG00000013612 2:52188216-52188479   CU856608,CH242-517F5,2:52162696-52188481
(Clone quality: bE517F5 on chr=2; Num_of_Contigs=7; )
UF location ⇒ 2:52187982-52188073   CU856608,CH242-517F5,2:52162696-52188481
(Clone quality: bE517F5 on chr=2; Num_of_Contigs=7; )
UF location ⇒ 2:52188215-52188481    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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