A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RPLP2   ENSSSCG00000002850 6:25748470-25748817   FP103061,CH242-281J16,6:25716091-25775491
(Clone quality: bE281J16 on chr=6; Num_of_Contigs=11; )
RPN1   ENSSSCG00000011612 13:59216637-59233111    
RPN2   ENSSSCG00000007330 17:42575713-42691863    
RPP14   ENSSSCG00000011473 13:33694957-33705545   CU914707,CH242-290I23,13:33655629-33831490
(Clone quality: bE290I23 on chr=13; Num_of_Contigs=1; )
RPP25   ENSSSCG00000001888 7:63871729-63872328   CU407105,CH242-94I2,7:63823101-63900742
(Clone quality: bE94I2 on chr=7; Num_of_Contigs=8; )
RPP30   ENSSSCG00000010460 14:107508067-107537370    
RPRD1B   ENSSSCG00000007342 17:43500949-43554594   CU467005,CH242-240I5,17:43456836-43555601
(Clone quality: bE240I5 on chr=17; Num_of_Contigs=8; )
RPRM   ENSSSCG00000015869 15:57131577-57131906   CU571304,CH242-6H9,15:57122726-57132406
(Clone quality: bE6H9 on chr=15; Num_of_Contigs=8; )
RPRML   ENSSSCG00000017320 12:15697104-15697466   FP017135,CH242-165C14,12:15690422-15741042
(Clone quality: bE165C14 on chr=12; Num_of_Contigs=11; )
RPS10L   ENSSSCG00000001528 7:34928659-34936021   CU468519,CH242-151L19,7:34915385-34944267
(Clone quality: bE151L19 on chr=7; Num_of_Contigs=11; )
RPS11P5   ENSSSCG00000003165 6:37963997-37966466   FP102665,CH242-289C15,6:37963305-38017162
(Clone quality: bE289C15 on chr=6; Num_of_Contigs=6; )
RPS12   ENSSSCG00000004177 1:32410218-32412851   CU041311,CH242-393L4,1:32405122-32529539
(Clone quality: bE393L4 on chr=1; Num_of_Contigs=2; )
RPS13   ENSSSCG00000013381 2:39377030-39379842   CU657921,CH242-47I9,2:39343452-39438781
(Clone quality: bE47I9 on chr=2; Num_of_Contigs=5; )
RPS15   ENSSSCG00000009507 11:67934080-67934515   CT967300,CH242-297K23,11:67925172-67935667
(Clone quality: bE297K23 on chr=11; Num_of_Contigs=8; )
RPS17P2   ENSSSCG00000014078 2:73079541-73079945   CU915596,CH242-427N12,2:73070689-73095121
(Clone quality: bE427N12 on chr=2; Num_of_Contigs=5; )
RPS18   ENSSSCG00000008767 8:22051714-22052172   CU655822,CH242-260D8,8:22041646-22055994
(Clone quality: bE260D8 on chr=8; Num_of_Contigs=3; )
RPS19   ENSSSCG00000003042 6:34623785-34630944   FP015926,CH242-183C8,6:34614693-34644455
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
RPS19BP1   ENSSSCG00000000083 5:5054999-5058430   CU424445,CH242-128A11,5:5029969-5093393
(Clone quality: bE128A11 on chr=5; Num_of_Contigs=8; )
RPS20   ENSSSCG00000006249 4:78657066-78658381   CU407092,CH242-518H24,4:78579444-78680435
(Clone quality: bE518H24 on chr=4; Num_of_Contigs=5; )
RPS21   ENSSSCG00000002529 7:131441195-131441446   CU633200,CH242-302J3,7:131411958-131466490
(Clone quality: bE302J3 on chr=7; Num_of_Contigs=7; )
RPS23   ENSSSCG00000014133 2:80100752-80102633   CU984598,CH242-521E11,2:80099744-80157082
(Clone quality: bE521E11 on chr=2; Num_of_Contigs=5; )
RPS24   ENSSSCG00000010328 14:83839069-83846368   CU407090,CH242-515L11,14:83754163-83877970
(Clone quality: bE515L11 on chr=14; Num_of_Contigs=4; )
RPS25P8   ENSSSCG00000015103 9:44829714-44832972   CU695209,CH242-241K21,9:44763573-44853404
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
RPS27A   ENSSSCG00000008407 3:80142723-80145339   FP102545,CH242-118N13,3:80142586-80165283
(Clone quality: bE118N13 on chr=3; Num_of_Contigs=3; )
RPS27L   ENSSSCG00000004568 1:112269502-112274512   CU606936,CH242-108A5,1:112266745-112286654
(Clone quality: bE108A5 on chr=1; Num_of_Contigs=6; )
RPS27P13   ENSSSCG00000006558 4:99736893-99927540    
RPS3AP47   ENSSSCG00000009458 11:44117007-44118070   CT961044,CH242-88E23,11:44107678-44126785
(Clone quality: bE88E23 on chr=11; Num_of_Contigs=3; )
RPS4P21   ENSSSCG00000016240 15:119908978-119909729   CU694832,CH242-176E14,15:119858295-119931879
(Clone quality: bE176E14 on chr=15; Num_of_Contigs=6; )
RPS5   ENSSSCG00000004002 6:123178194-123183998   CU928881,CH242-15P9,6:123128570-123231242
(Clone quality: bE15P9 on chr=6; Num_of_Contigs=4; )
RPS6   ENSSSCG00000005209 1:226439078-226440062   CU457399,CH242-185B23,1:226415512-226461501
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
RPS6KA1   ENSSSCG00000003558 6:57594200-57622548    
RPS6KA2   ENSSSCG00000004022 1:2731746-2794532    
RPS6KA3   ENSSSCG00000012163 X:15391129-15432184   FP085383,CH242-456J9,X:15380091-15432347
(Clone quality: bE456J9 on chr=X; Num_of_Contigs=4; )
RPS6KA5   ENSSSCG00000002437 7:120426821-120481073    
RPS6KA6   ENSSSCG00000012456 X:66396596-66518208    
RPS6KB1 ENSSSCG00000017670 12:34247951-34292168   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
RPS6KB1 location ⇒ 12:34281249-34281356   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
RPS6KB1 location ⇒ 12:34286564-34286673   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
RPS6KB1 location ⇒ 12:34290468-34290589   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
RPS6KB1 location ⇒ 12:34291746-34291992   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
RPS6KB2 location ⇒ 2:3474101-3473951   CU633429,CH242-6G2,2:3468458-3486670
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
RPS6KB2 location ⇒ 2:3476011-3475859   CU633429,CH242-6G2,2:3468458-3486670
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
RPS6KB2 location ⇒ 2:3674087-3673937   CU914251,CH242-230J11,2:3670365-3679624
(Clone quality: bE230J11 on chr=2; Num_of_Contigs=8; )
RPS6KB2 location ⇒ 2:3675997-3675845   CU914251,CH242-230J11,2:3670365-3679624
(Clone quality: bE230J11 on chr=2; Num_of_Contigs=8; )
RPS6KC1   ENSSSCG00000015587 9:122843547-122906126    
RPS6KL1   ENSSSCG00000002375 7:106367880-106385403   CT797477,CH242-140C11,7:106303131-106390499
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
RPS7 location ⇒ 1:195389955-195389286   CU571005,CH242-144E24,1:195335953-195471402
(Clone quality: bE144E24 on chr=1; Num_of_Contigs=6; )
RPS7 location ⇒ 1:195559105-195558436   CU928646,CH242-520E1,1:195557160-195585014
(Clone quality: bE520E1 on chr=1; Num_of_Contigs=7; )
RPS8   ENSSSCG00000003930 6:119372562-119375623   CU928738,CH242-6J15,6:119339955-119396828
(Clone quality: bE6J15 on chr=6; Num_of_Contigs=6; )
RPSA location ⇒ 6:83841454-83842478   CU928418,CH242-185D1,6:83838496-83843644
(Clone quality: bE185D1 on chr=6; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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