A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U5   ENSSSCG00000018770 15:86600383-86600494   CU570823,CH242-194O20,15:86571596-86746459
(Clone quality: bE194O20 on chr=15; Num_of_Contigs=1; )
U5   ENSSSCG00000019441 15:86546442-86546553   CU480623,CH242-332P5,15:86535887-86548554
(Clone quality: bE332P5 on chr=15; Num_of_Contigs=8; )
U5   ENSSSCG00000018321 6:49025499-49025615   FP102316,CH242-204J17,6:49019872-49032782
(Clone quality: bE204J17 on chr=6; Num_of_Contigs=9; )
U5   ENSSSCG00000018608 9:124916570-124916685   CU466401,CH242-418L12,9:124872136-124954086
(Clone quality: bE418L12 on chr=9; Num_of_Contigs=2; )
U5   ENSSSCG00000019638 6:119412510-119412625   CU928738,CH242-6J15,6:119396929-119424440
(Clone quality: bE6J15 on chr=6; Num_of_Contigs=6; )
U5   ENSSSCG00000018385 6:48843692-48843808   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
U6   ENSSSCG00000019351 8:28167291-28167393   CU466258,CH242-77I17,8:28148157-28176731
(Clone quality: bE77I17 on chr=8; Num_of_Contigs=5; )
U6   ENSSSCG00000019297 X:120964722-120964827 FP015864,CH242-76P15,X:120821749-121016103
(Clone quality: bE76P15 on chr=X; Num_of_Contigs=1; ) 		 
U6   ENSSSCG00000019325 4:74042759-74042865   CU571350,CH242-231P23,4:74042352-74160619
(Clone quality: bE231P23 on chr=4; Num_of_Contigs=3; )
U6   ENSSSCG00000019965 X:63507862-63507968   FP074891,CH242-212O17,X:63421719-63511817
(Clone quality: bE212O17 on chr=X; Num_of_Contigs=3; )
U6   ENSSSCG00000019310 2:87642195-87642301   FP016174,CH242-85M16,2:87631914-87649229
(Clone quality: bE85M16 on chr=2; Num_of_Contigs=15; )
U6   ENSSSCG00000019315 2:5450772-5450875 CU457406,CH242-284K16,2:5352106-5575890
(Clone quality: bE284K16 on chr=2; Num_of_Contigs=20; ) 		 
U6   ENSSSCG00000019305 1:95933252-95933355   CU041245,CH242-386L24,1:95906581-95942883
(Clone quality: bE386L24 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019319 9:119578587-119578693   CU915512,CH242-502G24,9:119575878-119580789
(Clone quality: bE502G24 on chr=9; Num_of_Contigs=7; )
U6   ENSSSCG00000019968 13:127016842-127016948   FP085482,CH242-139E8,13:127002874-127062131
(Clone quality: bE139E8 on chr=13; Num_of_Contigs=4; )
U6   ENSSSCG00000019274 13:135722936-135723042   CU550653,CH242-147K14,13:135688905-135744881
(Clone quality: bE147K14 on chr=13; Num_of_Contigs=7; )
U6   ENSSSCG00000019279 4:13453962-13454064   CU469059,CH242-75N15,4:13289905-13464174
(Clone quality: bE75N15 on chr=4; Num_of_Contigs=3; )
U6   ENSSSCG00000019958 18:7725584-7725690   CU655865,CH242-334M24,18:7724300-7751098
(Clone quality: bE334M24 on chr=18; Num_of_Contigs=7; )
U6   ENSSSCG00000019308 1:260316229-260316333   CU062655,CH242-136A13,1:260296272-260358215
(Clone quality: bE136A13 on chr=1; Num_of_Contigs=2; )
U6   ENSSSCG00000019342 15:55266184-55266286   CU570814,CH242-12B17,15:55223996-55277307
(Clone quality: bE12B17 on chr=15; Num_of_Contigs=10; )
U6   ENSSSCG00000019289 15:50775084-50775188   CU469196,CH242-416M4,15:50774141-50784096
(Clone quality: bE416M4 on chr=15; Num_of_Contigs=4; )
U6   ENSSSCG00000019288 4:108044961-108045067   CU861521,CH242-137N11,4:108041628-108046531
(Clone quality: bE137N11 on chr=4; Num_of_Contigs=13; )
U6   ENSSSCG00000019307 9:107964846-107964946   CU856594,CH242-328D16,9:107962512-108048150
(Clone quality: bE328D16 on chr=9; Num_of_Contigs=7; )
U6   ENSSSCG00000019287 15:11029580-11029684   CU915355,CH242-404N16,15:11018679-11070386
(Clone quality: bE404N16 on chr=15; Num_of_Contigs=3; )
U6   ENSSSCG00000019286 11:37331801-37331907   CU694558,CH242-181O16,11:37319046-37334052
(Clone quality: bE181O16 on chr=11; Num_of_Contigs=4; )
U6   ENSSSCG00000019989 7:24709744-24709850 CU607067,CH242-469P22,7:24676460-24783185
(Clone quality: bE469P22 on chr=7; Num_of_Contigs=2; ) 		 
U6   ENSSSCG00000019336 7:82275552-82275657   CU468526,CH242-14D10,7:82261915-82310389
(Clone quality: bE14D10 on chr=7; Num_of_Contigs=8; )
U6   ENSSSCG00000019966 6:67330093-67330196   CU929643,CH242-39J4,6:67320750-67366323
(Clone quality: bE39J4 on chr=6; Num_of_Contigs=3; )
U6   ENSSSCG00000019303 6:56712168-56712273   CU972460,CH242-516P3,6:56706916-56730593
(Clone quality: bE516P3 on chr=6; Num_of_Contigs=14; )
U6   ENSSSCG00000019994 13:91059782-91059891   CU469339,CH242-386F18,13:91054018-91062527
(Clone quality: bE386F18 on chr=13; Num_of_Contigs=24; )
U6   ENSSSCG00000019975 13:68613292-68613399   CU468841,CH242-100D12,13:68597880-68629291
(Clone quality: bE100D12 on chr=13; Num_of_Contigs=8; )
U6   ENSSSCG00000019333 5:17322872-17322977   CU928648,CH242-523B11,5:17274658-17333972
(Clone quality: bE523B11 on chr=5; Num_of_Contigs=8; )
U6   ENSSSCG00000019974 15:122246973-122247079   FP102026,CH242-195A18,15:122238229-122261215
(Clone quality: bE195A18 on chr=15; Num_of_Contigs=5; )
U6   ENSSSCG00000019993 X:88199478-88199585 FP102359,CH242-275K7,X:88088976-88223627
(Clone quality: bE275K7 on chr=X; Num_of_Contigs=5; ) 		 
U6   ENSSSCG00000019272 5:27997692-27997795   CU633380,CH242-260D22,5:27907609-28003514
(Clone quality: bE260D22 on chr=5; Num_of_Contigs=3; )
U6   ENSSSCG00000019367 15:90242700-90242806   CU929024,CH242-58I10,15:90200345-90258465
(Clone quality: bE58I10 on chr=15; Num_of_Contigs=3; )
U6   ENSSSCG00000019269 5:2860918-2861024   CU928642,CH242-477C10,5:2845539-2874049
(Clone quality: bE477C10 on chr=5; Num_of_Contigs=6; )
U6   ENSSSCG00000019976 3:15036055-15036153   FP102616,CH242-199K9,3:15009364-15044053
(Clone quality: bE199K9 on chr=3; Num_of_Contigs=7; )
U6   ENSSSCG00000019360 7:62172632-62172738   CT868728,CH242-234A20,7:62168965-62277689
(Clone quality: bE234A20 on chr=7; Num_of_Contigs=3; )
U6   ENSSSCG00000019362 11:37402348-37402453   CU633801,CH242-391O22,11:37400200-37402622
(Clone quality: bE391O22 on chr=11; Num_of_Contigs=24; )
U6   ENSSSCG00000019302 X:47514921-47515018   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
U6   ENSSSCG00000019320 15:124308528-124308634   CU463148,CH242-439L13,15:124305719-124310666
(Clone quality: bE439L13 on chr=15; Num_of_Contigs=7; )
U6   ENSSSCG00000019970 9:63378852-63378956   FP102849,CH242-21K8,9:63371826-63379831
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
U6   ENSSSCG00000019301 9:40354426-40354533   CU694638,CH242-59I6,9:40350813-40363882
(Clone quality: bE59I6 on chr=9; Num_of_Contigs=9; )
U6   ENSSSCG00000019972 7:14083449-14083555   CU468427,CH242-394H1,7:14049025-14085208
(Clone quality: bE394H1 on chr=7; Num_of_Contigs=3; )
U6   ENSSSCG00000019330 7:41022660-41022766   CU467953,CH242-271F1,7:41017978-41025802
(Clone quality: bE271F1 on chr=7; Num_of_Contigs=25; )
U6   ENSSSCG00000019331 16:14055848-14055954   CU571023,CH242-229F11,16:14046719-14060323
(Clone quality: bE229F11 on chr=16; Num_of_Contigs=24; )
U6   ENSSSCG00000019268 12:9477048-9477150   CU694700,CH242-275L18,12:9455130-9479503
(Clone quality: bE275L18 on chr=12; Num_of_Contigs=10; )
U6   ENSSSCG00000019365 1:37197096-37197202   FP089494,CH242-263N6,1:37074530-37199920
(Clone quality: bE263N6 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019979 1:137295798-137295904   CU234165,CH242-252B18,1:137235363-137339770
(Clone quality: bE252B18 on chr=1; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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