A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RCOR3 location ⇒ 9:124274021-124274593   CU915362,CH242-471A15,9:124253451-124289313
(Clone quality: bE471A15 on chr=9; Num_of_Contigs=16; )
RCOR3 location ⇒ 9:124274826-124275888   CU915362,CH242-471A15,9:124253451-124289313
(Clone quality: bE471A15 on chr=9; Num_of_Contigs=16; )
RCOR3 location ⇒ 9:124276096-124276898   CU915362,CH242-471A15,9:124253451-124289313
(Clone quality: bE471A15 on chr=9; Num_of_Contigs=16; )
RCSD1   ENSSSCG00000006307 4:86639332-86705436    
RD3   ENSSSCG00000002553 7:133015215-133016166   CU693433,CH242-82C21,7:132988650-133034084
(Clone quality: bE82C21 on chr=7; Num_of_Contigs=8; )
RDBP ENSSSCG00000001423 7:27862552-27869051 CT956038,CH242-183N12,7:27767223-27953076
(Clone quality: bE183N12 on chr=7; Num_of_Contigs=3; ) 		 
RDH10 ENSSSCG00000006181 4:64779818-64807916   CU137734,CH242-66B9,4:64759703-64839746
(Clone quality: bE66B9 on chr=4; Num_of_Contigs=10; )
RDH11 ENSSSCG00000002296 7:99822720-99858776   CT868701,CH242-284D22,7:99807668-99890301
(Clone quality: bE284D22 on chr=7; Num_of_Contigs=4; )
RDH12 ENSSSCG00000002297 7:99887483-99899828    
RDH14   ENSSSCG00000008608 3:110908348-110912715   FP236372,CH242-16J2,3:110875808-110953282
(Clone quality: bE16J2 on chr=3; Num_of_Contigs=4; )
RDH8 ENSSSCG00000013666 2:53482953-53488863   CU462940,CH242-319N14,2:53455010-53490422
(Clone quality: bE319N14 on chr=2; Num_of_Contigs=3; )
RDX ENSSSCG00000015013 9:37246242-37286547    
RDX location ⇒ 9:37253936-37254212   CU972358,CH242-40D16,9:37234214-37261120
(Clone quality: bE40D16 on chr=9; Num_of_Contigs=2; )
RDX location ⇒ 9:37259529-37259693   CU972358,CH242-40D16,9:37234214-37261120
(Clone quality: bE40D16 on chr=9; Num_of_Contigs=2; )
RDX location ⇒ 9:37284673-37284916   CU972358,CH242-40D16,9:37261221-37305147
(Clone quality: bE40D16 on chr=9; Num_of_Contigs=2; )
RDX location ⇒ 9:37286363-37286759   CU972358,CH242-40D16,9:37261221-37305147
(Clone quality: bE40D16 on chr=9; Num_of_Contigs=2; )
REC8   ENSSSCG00000002001 7:81459577-81466593   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
REC8L1 ENSSSCG00000002001 7:81459577-81466593   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
REC8L1 location ⇒ 7:81464973-81464853   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
REC8L1 location ⇒ 7:81465460-81465383   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
REC8L1 location ⇒ 7:81465687-81465544   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
REC8L1 location ⇒ 7:81465857-81465791   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
RECK   ENSSSCG00000005338 1:247999835-248059251    
RECQL   ENSSSCG00000000580 5:49950143-50062422    
REEP1   ENSSSCG00000008223 3:53378880-53467925    
REEP3 ENSSSCG00000010229 14:69890847-69942509   CT841553,CH242-264L24,14:69864436-69950393
(Clone quality: bE264L24 on chr=14; Num_of_Contigs=3; )
REEP3 location ⇒ 14:69644687-69644902   CU468521,CH242-83M22,14:69635714-69677060
(Clone quality: bE83M22 on chr=14; Num_of_Contigs=6; )
REEP3 location ⇒ 14:69737943-69737728   CT954246,CH242-294O15,14:69713844-69864435
(Clone quality: bE294O15 on chr=14; Num_of_Contigs=2; )
REEP3 location ⇒ 14:69929801-69929952   CT841553,CH242-264L24,14:69864436-69950393
(Clone quality: bE264L24 on chr=14; Num_of_Contigs=3; )
REEP3 location ⇒ 14:69942417-69942585   CT841553,CH242-264L24,14:69864436-69950393
(Clone quality: bE264L24 on chr=14; Num_of_Contigs=3; )
REEP4   ENSSSCG00000009617 14:6368071-6372116   CT827951,CH242-289H4,14:6366080-6374281
(Clone quality: bE289H4 on chr=14; Num_of_Contigs=6; )
REEP5 ENSSSCG00000014205 2:105573676-105611398    
REEP5 ENSSSCG00000014205 2:105573676-105611398    
REEP5 location ⇒ 2:105597618-105597756   CU929820,CH242-507P22,2:105593739-105607530
(Clone quality: bE507P22 on chr=2; Num_of_Contigs=6; )
REEP5 location ⇒ 2:105610669-105610898   CU856120,CH242-510G20,2:105607531-105633212
(Clone quality: bE510G20 on chr=2; Num_of_Contigs=10; )
REEP5 location ⇒ 2:105611773-105611838   CU856120,CH242-510G20,2:105607531-105633212
(Clone quality: bE510G20 on chr=2; Num_of_Contigs=10; )
REEP5 location ⇒ 2:105612981-105613066   CU856120,CH242-510G20,2:105607531-105633212
(Clone quality: bE510G20 on chr=2; Num_of_Contigs=10; )
REG3A location ⇒ 3:59255450-59255639   FP102293,CH242-307A4,3:59207190-59305624
(Clone quality: bE307A4 on chr=3; Num_of_Contigs=3; )
REG3A location ⇒ 3:59257917-59258198   FP102293,CH242-307A4,3:59207190-59305624
(Clone quality: bE307A4 on chr=3; Num_of_Contigs=3; )
REG3A location ⇒ 3:59554108-59553827   CU694523,CH242-64C23,3:59539565-59569986
(Clone quality: bE64C23 on chr=3; Num_of_Contigs=16; )
REG3A location ⇒ 3:59556575-59556386   CU694523,CH242-64C23,3:59539565-59569986
(Clone quality: bE64C23 on chr=3; Num_of_Contigs=16; )
REG4   ENSSSCG00000006712 4:105518342-105535598   CU468974,CH242-143C13,4:105496818-105549303
(Clone quality: bE143C13 on chr=4; Num_of_Contigs=10; )
REL ENSSSCG00000008388 3:74589742-74615189   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
REL location ⇒ 3:74593673-74593877   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
REL location ⇒ 3:74593980-74594084   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
REL location ⇒ 3:74595358-74595501   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
REL location ⇒ 3:74612553-74612704   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
RELA ENSSSCG00000012981 2:4994411-5002906    
RELA location ⇒ 2:5000337-5000201   CU856129,CH242-95H3,2:4988912-5001366
(Clone quality: bE95H3 on chr=2; Num_of_Contigs=5; )
RELA location ⇒ 2:5001793-5001643   CU856129,CH242-95H3,2:5001467-5005117
(Clone quality: bE95H3 on chr=2; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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