A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RELA location ⇒ 2:5002102-5001950   CU856129,CH242-95H3,2:5001467-5005117
(Clone quality: bE95H3 on chr=2; Num_of_Contigs=5; )
RELA location ⇒ 2:5091405-5091269   CU914305,CH242-95H15,2:5086647-5092511
(Clone quality: bE95H15 on chr=2; Num_of_Contigs=19; )
RELL1   ENSSSCG00000008772 8:24543953-24551988   CU640480,CH242-521O14,8:24529927-24554177
(Clone quality: bE521O14 on chr=8; Num_of_Contigs=9; )
RELL2   ENSSSCG00000014389 2:130198288-130201115   CU463118,CH242-312A3,2:130116991-130237824
(Clone quality: bE312A3 on chr=2; Num_of_Contigs=2; )
RELN ENSSSCG00000015426 9:96504829-96632196    
RELN location ⇒ 9:96504530-96503802   CU694473,CH242-317G7,9:96493472-96506159
(Clone quality: bE317G7 on chr=9; Num_of_Contigs=6; )
RELT ENSSSCG00000008772 8:24543953-24551988   CU640480,CH242-521O14,8:24529927-24554177
(Clone quality: bE521O14 on chr=8; Num_of_Contigs=9; )
RELT ENSSSCG00000014389 2:130198288-130201115   CU463118,CH242-312A3,2:130116991-130237824
(Clone quality: bE312A3 on chr=2; Num_of_Contigs=2; )
REM1   ENSSSCG00000006992 17:5660747-5663005   CU469367,CH242-177G4,17:5660436-5664016
(Clone quality: bE177G4 on chr=17; Num_of_Contigs=30; )
REN   ENSSSCG00000015278 9:62337294-62409734    
RENBP   ENSSSCG00000012792 X:122774510-122782129   CU915581,CH242-139K22,X:122729751-122810838
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
REP15   ENSSSCG00000000548 5:44605566-44606270   CU062551,CH242-2G17,5:44513004-44648165
(Clone quality: bE2G17 on chr=5; Num_of_Contigs=3; )
REPS1   ENSSSCG00000004146 1:26816114-26897029    
REPS2   ENSSSCG00000012150 X:12872405-13122217    
RERE   ENSSSCG00000003387 6:46457956-46465984    
RERG   ENSSSCG00000000602 5:54678984-54775353    
RERGL   ENSSSCG00000000594 5:52616199-52624086   CU457493,CH242-37H2,5:52590000-52626087
(Clone quality: bE37H2 on chr=5; Num_of_Contigs=1; )
RESP18   ENSSSCG00000016219 15:114358923-114366048   CU457453,CH242-470M7,15:114348562-114366364
(Clone quality: bE470M7 on chr=15; Num_of_Contigs=11; )
REST   ENSSSCG00000008893 8:46708001-46723173    
RET ENSSSCG00000002455 7:122379060-122412679   CU468886,CH242-145B2,7:122356408-122435919
(Clone quality: bE145B2 on chr=7; Num_of_Contigs=2; )
RET ENSSSCG00000001219 7:24193693-24211158 FP085562,CH242-160O9,7:24118819-24263585
(Clone quality: bE160O9 on chr=7; Num_of_Contigs=12; ) 		 
RET ENSSSCG00000010199 14:63685790-63740256    
RET ENSSSCG00000006757 4:110415642-110546010    
RET ENSSSCG00000004426 1:81940395-81941500   CU019570,CH242-13F22,1:81895269-82022088
(Clone quality: bE13F22 on chr=1; Num_of_Contigs=3; )
RET location ⇒ 14:63710630-63710703   CT963083,CH242-29P3,14:63675927-63711552
(Clone quality: bE29P3 on chr=14; Num_of_Contigs=5; )
RET location ⇒ 14:63736272-63736345   CT990536,CH242-194C16,14:63711553-63927511
(Clone quality: bE194C16 on chr=14; Num_of_Contigs=1; )
RET location ⇒ 14:63738404-63738552   CT990536,CH242-194C16,14:63711553-63927511
(Clone quality: bE194C16 on chr=14; Num_of_Contigs=1; )
RET location ⇒ 14:63739891-63740256   CT990536,CH242-194C16,14:63711553-63927511
(Clone quality: bE194C16 on chr=14; Num_of_Contigs=1; )
RETN ENSSSCG00000013575 2:51029417-51030832   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
RETN location ⇒ 2:51029697-51029578   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
RETN location ⇒ 2:51029698-51029420   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
RETN location ⇒ 2:51030111-51030033   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
RETN location ⇒ 2:51030635-51030507   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
RETNLB ENSSSCG00000011939 13:112119404-112120668   CU633542,CH242-152C22,13:112112989-112124049
(Clone quality: bE152C22 on chr=13; Num_of_Contigs=5; )
RETSAT ENSSSCG00000008237 3:54100353-54115014   CU951451,CH242-157C24,3:54090565-54166505
(Clone quality: bE157C24 on chr=3; Num_of_Contigs=5; )
REV1   ENSSSCG00000008179 3:50472779-50518327    
REV3L   ENSSSCG00000004418 1:80685154-80703933   FP102400,CH242-288J22,1:80683821-80715737
(Clone quality: bE288J22 on chr=1; Num_of_Contigs=3; )
REXO1   ENSSSCG00000013447 2:46953561-46974836    
REXO2   ENSSSCG00000015056 9:40713728-40724459   CU856090,CH242-161C5,9:40675140-40798853
(Clone quality: bE161C5 on chr=9; Num_of_Contigs=4; )
RF00251 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00276 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00276 Intro   ENSSSCG00000018342 X:46664988-46665049   CU480790,CH242-209C11,X:46657117-46674665
(Clone quality: bE209C11 on chr=X; Num_of_Contigs=4; )
RF00282 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00428 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00428 part   ENSSSCG00000018699 7:27701539-27701669 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
RFC1   ENSSSCG00000008788 8:25998196-26032656    
RFC3   ENSSSCG00000009349 11:9896160-9914960   CU076062,CH242-147C22,11:9879860-10061607
(Clone quality: bE147C22 on chr=11; Num_of_Contigs=1; )
RFC4   ENSSSCG00000011804 13:94187216-94202362   CU633961,CH242-82L2,13:94145951-94228460
(Clone quality: bE82L2 on chr=13; Num_of_Contigs=4; )
RFC5   ENSSSCG00000009854 14:34862734-34874957   CU468330,CH242-221D19,14:34832583-34894513
(Clone quality: bE221D19 on chr=14; Num_of_Contigs=2; )
RFESD   ENSSSCG00000014141 2:82832309-82842797   FP016071,CH242-117B6,2:82778329-82845213
(Clone quality: bE117B6 on chr=2; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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