A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000018440 1:54278379-54278483   CU234124,CH242-263P12,1:54245362-54365233
(Clone quality: bE263P12 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000018167 14:88874695-88874800   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
U6   ENSSSCG00000018500 6:29613767-29613873   CU929964,CH242-62K4,6:29482801-29678966
(Clone quality: bE62K4 on chr=6; Num_of_Contigs=2; )
U6   ENSSSCG00000018499 15:10655093-10655186   CU571339,CH242-143F23,15:10638225-10705344
(Clone quality: bE143F23 on chr=15; Num_of_Contigs=2; )
U6   ENSSSCG00000018496 12:16563922-16564028   FP102430,CH242-164B23,12:16551583-16601891
(Clone quality: bE164B23 on chr=12; Num_of_Contigs=11; )
U6   ENSSSCG00000018492 14:29081567-29081673   CU407023,CH242-144M13,14:28975140-29158095
(Clone quality: bE144M13 on chr=14; Num_of_Contigs=3; )
U6   ENSSSCG00000018490 X:81671428-81671534   FP102403,CH242-141K19,X:81645708-81686003
(Clone quality: bE141K19 on chr=X; Num_of_Contigs=9; )
U6   ENSSSCG00000018486 6:26785583-26785691   FP016093,CH242-194E7,6:26711228-26809293
(Clone quality: bE194E7 on chr=6; Num_of_Contigs=4; )
U6   ENSSSCG00000018432 3:23736296-23736399   FP236408,CH242-138D10,3:23727880-23740119
(Clone quality: bE138D10 on chr=3; Num_of_Contigs=11; )
U6   ENSSSCG00000019460 1:207675193-207675299   CU041225,CH242-411I24,1:207662352-207705871
(Clone quality: bE411I24 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019479 3:73994710-73994812   CU929839,CH242-57O21,3:73990329-73999633
(Clone quality: bE57O21 on chr=3; Num_of_Contigs=7; )
U6   ENSSSCG00000018503 4:64555155-64555257   CU462961,CH242-392K9,4:64529716-64592061
(Clone quality: bE392K9 on chr=4; Num_of_Contigs=7; )
U6   ENSSSCG00000018505 X:72228804-72228910 CU311198,CH242-510N18,X:72098600-72284209
(Clone quality: bE510N18 on chr=X; Num_of_Contigs=1; ) 		 
U6   ENSSSCG00000018166 10:33767002-33767108   CU463937,CH242-516D12,10:33763611-33802979
(Clone quality: bE516D12 on chr=10; Num_of_Contigs=7; )
U6   ENSSSCG00000018435 2:9885301-9885408   FP102200,CH242-522L10,2:9859325-9897308
(Clone quality: bE522L10 on chr=2; Num_of_Contigs=8; )
U6   ENSSSCG00000018482 18:6412656-6412749   CU655925,CH242-295C16,18:6388696-6418959
(Clone quality: bE295C16 on chr=18; Num_of_Contigs=15; )
U6   ENSSSCG00000018181 16:49311693-49311794   CU930030,CH242-65C9,16:49300926-49331681
(Clone quality: bE65C9 on chr=16; Num_of_Contigs=4; )
U6   ENSSSCG00000018523 17:42476932-42477040   CU606915,CH242-133O2,17:42464913-42481089
(Clone quality: bE133O2 on chr=17; Num_of_Contigs=6; )
U6   ENSSSCG00000018519 9:8059546-8059652   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
U6   ENSSSCG00000018517 13:87652252-87652359   CU856317,CH242-95D16,13:87650447-87659226
(Clone quality: bE95D16 on chr=13; Num_of_Contigs=17; )
U6   ENSSSCG00000018515 18:37258664-37258768   FP236688,CH242-146M2,18:37257500-37263258
(Clone quality: bE146M2 on chr=18; Num_of_Contigs=18; )
U6   ENSSSCG00000018514 14:2118859-2118965   CU407339,CH242-508O4,14:2088215-2197391
(Clone quality: bE508O4 on chr=14; Num_of_Contigs=2; )
U6   ENSSSCG00000018511 8:33113243-33113344   FP016075,CH242-331B8,8:33098417-33120320
(Clone quality: bE331B8 on chr=8; Num_of_Contigs=4; )
U6   ENSSSCG00000018157 4:100090704-100090810   CU137691,CH242-31M11,4:100057515-100115655
(Clone quality: bE31M11 on chr=4; Num_of_Contigs=9; )
U6   ENSSSCG00000019480 13:136397185-136397289   CU927949,CH242-237L3,13:136311182-136433862
(Clone quality: bE237L3 on chr=13; Num_of_Contigs=3; )
U6   ENSSSCG00000019904 18:17634028-17634134   CU638846,CH242-272C14,18:17604734-17699485
(Clone quality: bE272C14 on chr=18; Num_of_Contigs=4; )
U6   ENSSSCG00000019919 4:59631743-59631848   CU469094,CH242-123H21,4:59603136-59699104
(Clone quality: bE123H21 on chr=4; Num_of_Contigs=3; )
U6   ENSSSCG00000019471 1:113081242-113081348   CU694592,CH242-282E10,1:113077093-113162332
(Clone quality: bE282E10 on chr=1; Num_of_Contigs=2; )
U6   ENSSSCG00000019472 10:30510396-30510502   FP236727,CH242-511I17,10:30492038-30528017
(Clone quality: bE511I17 on chr=10; Num_of_Contigs=7; )
U6   ENSSSCG00000019473 6:65462653-65462758 CR956622,PigE-219N9,6:65300804-65474973
(No clone quality info on bT219N9) 		 
U6   ENSSSCG00000019916 9:48299711-48299813   CU639472,CH242-130N11,9:48226708-48363863
(Clone quality: bE130N11 on chr=9; Num_of_Contigs=2; )
U6   ENSSSCG00000019499 10:41022695-41022802   CU855507,CH242-237K9,10:41007569-41044512
(Clone quality: bE237K9 on chr=10; Num_of_Contigs=6; )
U6   ENSSSCG00000019501 14:64529136-64529242   CU407317,CH242-352N3,14:64428333-64534837
(Clone quality: bE352N3 on chr=14; Num_of_Contigs=2; )
U6   ENSSSCG00000019539 6:65515375-65515480 CR956427,CH242-51O7,6:65474974-65651225
(No clone quality info on bE51O7) 		 
U6   ENSSSCG00000019547 16:44728432-44728538   FP085444,CH242-185P14,16:44727312-44749875
(Clone quality: bE185P14 on chr=16; Num_of_Contigs=5; )
U6   ENSSSCG00000019550 18:14103825-14103931   CU467575,CH242-383L21,18:14082196-14224814
(Clone quality: bE383L21 on chr=18; Num_of_Contigs=4; )
U6   ENSSSCG00000019470 8:16519961-16520073   CU914770,CH242-91N15,8:16519517-16522552
(Clone quality: bE91N15 on chr=8; Num_of_Contigs=9; )
U6   ENSSSCG00000019467 14:81618841-81618943   CT827874,CH242-276G24,14:81573188-81626709
(Clone quality: bE276G24 on chr=14; Num_of_Contigs=5; )
U6   ENSSSCG00000019465 18:9176351-9176455   FP236752,CH242-135G1,18:9146556-9190823
(Clone quality: bE135G1 on chr=18; Num_of_Contigs=4; )
U6   ENSSSCG00000019487 14:74858402-74858499   CT990630,CH242-252D18,14:74823718-74858719
(Clone quality: bE252D18 on chr=14; Num_of_Contigs=6; )
U6   ENSSSCG00000019900 1:210611252-210611354   FP102266,CH242-81G10,1:210598988-210645569
(Clone quality: bE81G10 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019491 13:90997461-90997570   CU928395,CH242-293K9,13:90936049-90998999
(Clone quality: bE293K9 on chr=13; Num_of_Contigs=4; )
U6   ENSSSCG00000019496 18:29895796-29895902   CU914237,CH242-181O5,18:29885080-29901823
(Clone quality: bE181O5 on chr=18; Num_of_Contigs=6; )
U6   ENSSSCG00000019497 1:40722046-40722152   CU928609,CH242-459G3,1:40717154-40722689
(Clone quality: bE459G3 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019498 X:73663244-73663346   CU207402,CH242-503G1,X:73657276-73762565
(Clone quality: bE503G1 on chr=X; Num_of_Contigs=7; )
U6   ENSSSCG00000019908 15:99586964-99587063   CU466450,CH242-226D24,15:99585956-99593904
(Clone quality: bE226D24 on chr=15; Num_of_Contigs=13; )
U6   ENSSSCG00000019912 15:18648434-18648536   CU571026,CH242-250I12,15:18621373-18750697
(Clone quality: bE250I12 on chr=15; Num_of_Contigs=3; )
U6   ENSSSCG00000019914 17:26780310-26780416   CU041284,CH242-52P7,17:26778841-26795536
(Clone quality: bE52P7 on chr=17; Num_of_Contigs=6; )
U6   ENSSSCG00000019462 3:18590236-18590342   FP102305,CH242-254J12,3:18530709-18620175
(Clone quality: bE254J12 on chr=3; Num_of_Contigs=1; )
U6   ENSSSCG00000019552 1:220120090-220120195   CU627991,CH242-200J21,1:220119647-220123608
(Clone quality: bE200J21 on chr=1; Num_of_Contigs=17; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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