A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 2401 - 2500:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CD33 ENSSSCG00000003226 6:39295447-39301650   CU694842,CH242-204P3,6:39279332-39353368
(Clone quality: bE204P3 on chr=6; Num_of_Contigs=6; )
CD33 ENSSSCG00000003236 6:39481730-39501436   CU019573,CH242-21M5,6:39444132-39502362
(Clone quality: bE21M5 on chr=6; Num_of_Contigs=9; )
CD33 ENSSSCG00000004493 1:99284559-99290281   CU694902,CH242-378G17,1:99170632-99336108
(Clone quality: bE378G17 on chr=1; Num_of_Contigs=1; )
CD336 ENSSSCG00000001618 7:42015385-42021278   CU306815,CH242-32N5,7:41973045-42041868
(Clone quality: bE32N5 on chr=7; Num_of_Contigs=10; )
CD338 ENSSSCG00000009213 8:112296288-112514103    
CD339 ENSSSCG00000007067 17:19688741-19725371    
CD33L3 ENSSSCG00000004493 1:99284559-99290281   CU694902,CH242-378G17,1:99170632-99336108
(Clone quality: bE378G17 on chr=1; Num_of_Contigs=1; )
CD34 ENSSSCG00000015622 9:127094351-127118367    
CD340 ENSSSCG00000017497 12:20557656-20578620    
CD344 ENSSSCG00000014920 9:20877821-20879122   FP102391,CH242-358A3,9:20873313-20886557
(Clone quality: bE358A3 on chr=9; Num_of_Contigs=7; )
CD350 ENSSSCG00000009751 14:25010134-25011879   CU019576,CH242-288E21,14:24885177-25019758
(Clone quality: bE288E21 on chr=14; Num_of_Contigs=4; )
CD36 ENSSSCG00000015405 9:93201790-93249833   CU694770,CH242-168I5,9:93113331-93272735
(Clone quality: bE168I5 on chr=9; Num_of_Contigs=1; )
CD38 ENSSSCG00000008742 8:8366135-8381623    
CD39 ENSSSCG00000002355 7:105288426-105330499   CT797481,CH242-31K14,7:105227853-105414617
(Clone quality: bE31K14 on chr=7; Num_of_Contigs=1; )
CD39 ENSSSCG00000010497 14:112352301-112444933    
CD3D ENSSSCG00000015093 9:44525596-44529625   CU914235,CH242-177G19,9:44486144-44604301
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
CD3E ENSSSCG00000015092 9:44505053-44519343   CU914235,CH242-177G19,9:44486144-44604301
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
CD3G ENSSSCG00000015094 9:44530626-44540271   CU914235,CH242-177G19,9:44486144-44604301
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
CD3Z ENSSSCG00000006309 4:86799324-86892177 CU151848,CH242-192N14,4:86700413-86905931
(Clone quality: bE192N14 on chr=4; Num_of_Contigs=2; ) 		 
CD4 ENSSSCG00000001059 7:10571782-10589831    
CD4 ENSSSCG00000010538 14:115483488-115483955   CT827848,CH242-276N12,14:115431518-115501704
(Clone quality: bE276N12 on chr=14; Num_of_Contigs=5; )
CD4 ENSSSCG00000011201 13:4234402-4328152    
CD4 ENSSSCG00000012397 X:56853523-56857235   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
CD4 ENSSSCG00000012652 X:104537896-104549372    
CD4 ENSSSCG00000000687 5:59930618-59956620    
CD40 ENSSSCG00000007440 17:50399620-50408344    
CD40 ENSSSCG00000002525 7:130944988-130993025   CT998550,CH242-445C19,7:130928637-130997560
(Clone quality: bE445C19 on chr=7; Num_of_Contigs=6; )
CD40L ENSSSCG00000007440 17:50399620-50408344    
CD42b ENSSSCG00000010127 14:52410111-52411258   CU468497,CH242-430C1,14:52380763-52419017
(Clone quality: bE430C1 on chr=14; Num_of_Contigs=6; )
CD42c ENSSSCG00000010127 14:52410111-52411258   CU468497,CH242-430C1,14:52380763-52419017
(Clone quality: bE430C1 on chr=14; Num_of_Contigs=6; )
CD42d ENSSSCG00000011824 13:98944880-98946583   CU928370,CH242-309K5,13:98935619-99004797
(Clone quality: bE309K5 on chr=13; Num_of_Contigs=6; )
CD44 ENSSSCG00000013297 2:24136169-24228899    
CD45 ENSSSCG00000010907 10:22661389-22700150    
CD45 ENSSSCG00000010908 10:22721069-22743562   FP067416,CH242-483G3,10:22720837-22744862
(Clone quality: bE483G3 on chr=10; Num_of_Contigs=5; )
CD45 ENSSSCG00000012909 2:3468942-3469568   CU633429,CH242-6G2,2:3468458-3486670
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
CD46 ENSSSCG00000015293 9:63407760-63456410    
CD47 ENSSSCG00000011942 13:112560933-112606511   CU914353,CH242-125K22,13:112547929-112616121
(Clone quality: bE125K22 on chr=13; Num_of_Contigs=6; )
CD48 ENSSSCG00000006379 4:93278346-93292708   CU915315,CH242-208F9,4:93261946-93408226
(Clone quality: bE208F9 on chr=4; Num_of_Contigs=2; )
CD49a ENSSSCG00000016885 16:29202547-29281645    
CD49b ENSSSCG00000016887 16:29427892-29498935   CU928375,CH242-425K19,16:29401619-29534620
(Clone quality: bE425K19 on chr=16; Num_of_Contigs=1; )
CD49c ENSSSCG00000017578 12:24655910-24790905    
CD49d ENSSSCG00000016009 15:81544892-81624138   CU861559,CH242-348D16,15:81514178-81645419
(Clone quality: bE348D16 on chr=15; Num_of_Contigs=3; )
CD49e ENSSSCG00000000293 5:18143068-18165627   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
CD5 ENSSSCG00000013115 2:9524678-9534242   CU914270,CH242-323D11,2:9520060-9538986
(Clone quality: bE323D11 on chr=2; Num_of_Contigs=11; )
CD5 ENSSSCG00000006455 4:96025067-96042589 CU137732,CH242-59K14,4:95974742-96142492
(Clone quality: bE59K14 on chr=4; Num_of_Contigs=4; ) 		 
CD53 ENSSSCG00000006800 4:113726728-113756057    
CD55 ENSSSCG00000015749 15:31993420-32018200    
CD55 ENSSSCG00000015664 9:132465109-132465291   CU633410,CH242-391L17,9:132252384-132466044
(Clone quality: bE391L17 on chr=9; Num_of_Contigs=2; )
CD56 ENSSSCG00000015045 9:39876973-39943731   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
CD57 ENSSSCG00000015259 9:59287480-59384534    
CD58 ENSSSCG00000006738 4:108346796-108569574    
CD59 ENSSSCG00000013309 2:25595826-25616380    
CD5L ENSSSCG00000006455 4:96025067-96042589 CU137732,CH242-59K14,4:95974742-96142492
(Clone quality: bE59K14 on chr=4; Num_of_Contigs=4; ) 		 
CD6 ENSSSCG00000013111 2:9417713-9458152   CU914270,CH242-323D11,2:9406763-9458191
(Clone quality: bE323D11 on chr=2; Num_of_Contigs=11; )
CD61 ENSSSCG00000017306 12:14440438-14498372    
CD62 ENSSSCG00000006286 4:84377739-84387530   CU407291,CH242-513E17,4:84329694-84430611
(Clone quality: bE513E17 on chr=4; Num_of_Contigs=7; )
CD62 ENSSSCG00000006288 4:84453836-84489355 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
CD62E ENSSSCG00000006286 4:84377739-84387530   CU407291,CH242-513E17,4:84329694-84430611
(Clone quality: bE513E17 on chr=4; Num_of_Contigs=7; )
CD63 ENSSSCG00000000361 5:20079426-20127422    
CD64 ENSSSCG00000006678 4:103242867-103251849   CU462833,CH242-167L20,4:103208937-103337851
(Clone quality: bE167L20 on chr=4; Num_of_Contigs=2; )
CD68 ENSSSCG00000008769 8:23617243-23619485   CU406992,CH242-305H5,8:23609474-23775679
(Clone quality: bE305H5 on chr=8; Num_of_Contigs=1; )
CD68 ENSSSCG00000008769 8:23617243-23619485   CU406992,CH242-305H5,8:23609474-23775679
(Clone quality: bE305H5 on chr=8; Num_of_Contigs=1; )
CD69 ENSSSCG00000000653 5:58693397-58700536   CU633551,CH242-192N12,5:58674281-58796136
(Clone quality: bE192N12 on chr=5; Num_of_Contigs=4; )
CD70 ENSSSCG00000013548 2:49988613-49991587   CU694937,CH242-71B7,2:49979846-50046985
(Clone quality: bE71B7 on chr=2; Num_of_Contigs=4; )
CD70 ENSSSCG00000013543 2:49855557-49858531   CU929921,CH242-352E11,2:49850244-49867632
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
CD71 ENSSSCG00000011848 13:100772881-100799950 CU695181,CH242-182C12,13:100594044-100802412
(Clone quality: bE182C12 on chr=13; Num_of_Contigs=21; ) 		 
CD72 ENSSSCG00000005311 1:247438251-247445894   CU062658,CH242-97C14,1:247426659-247546707
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
CD79a ENSSSCG00000003041 6:34616593-34620152   FP015926,CH242-183C8,6:34614693-34644455
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CD79A ENSSSCG00000003041 6:34616593-34620152   FP015926,CH242-183C8,6:34614693-34644455
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CD79B ENSSSCG00000017283 12:12626857-12630260   CU466386,CH242-271O11,12:12583385-12667411
(Clone quality: bE271O11 on chr=12; Num_of_Contigs=5; )
CD79b ENSSSCG00000017283 12:12626857-12630260   CU466386,CH242-271O11,12:12583385-12667411
(Clone quality: bE271O11 on chr=12; Num_of_Contigs=5; )
CD80 ENSSSCG00000011899 13:105493732-105503556    
CD82 ENSSSCG00000013279 2:16274761-16458005    
CD83 ENSSSCG00000001059 7:10571782-10589831    
CD84 ENSSSCG00000006400 4:94052098-94054645   CU856127,CH242-86L20,4:94027417-94074463
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
CD84 ENSSSCG00000006381 4:93381789-93570006    
CD86 ENSSSCG00000011877 13:103961666-103995796   CU694886,CH242-322E12,13:103947006-104157780
(Clone quality: bE322E12 on chr=13; Num_of_Contigs=1; )
CD87 ENSSSCG00000003065 6:35092325-35107861    
CD89 ENSSSCG00000003284 6:41064930-41074740    
CD8A ENSSSCG00000008217 3:52919378-52926379   CU467723,CH242-297H15,3:52893862-52927344
(Clone quality: bE297H15 on chr=3; Num_of_Contigs=13; )
CD9 ENSSSCG00000000710 5:60379256-60418644    
CD90 ENSSSCG00000015122 9:45309364-45310847   CU951455,CH242-416J8,9:45293029-45311092
(Clone quality: bE416J8 on chr=9; Num_of_Contigs=2; )
CD91 ENSSSCG00000000423 5:21397928-21413617   CU633428,CH242-524E23,5:21392304-21414238
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
CD92 ENSSSCG00000005425 1:258582618-258743259    
CD93 ENSSSCG00000007116 17:31744235-31746961   CU606974,CH242-23K16,17:31739767-31793889
(Clone quality: bE23K16 on chr=17; Num_of_Contigs=5; )
CD94 ENSSSCG00000000642 5:58220196-58224166   CU856203,CH242-259K19,5:58140023-58263158
(Clone quality: bE259K19 on chr=5; Num_of_Contigs=4; )
CD95 ENSSSCG00000010448 14:105826565-105852532   CT737322,CH242-203A14,14:105756080-105909175
(Clone quality: bE203A14 on chr=14; Num_of_Contigs=1; )
CD96 ENSSSCG00000011935 13:111588741-111625422    
CD97 ENSSSCG00000013775 2:57169360-57186527    
CD99 ENSSSCG00000012744 X:120613640-120723500    
CD99L2 ENSSSCG00000012744 X:120613640-120723500    
CDA ENSSSCG00000004719 1:134776546-134786882    
CDA ENSSSCG00000003510 6:54281532-54287189   FP243370,CH242-400E6,6:54279457-54292260
(Clone quality: bE400E6 on chr=6; Num_of_Contigs=4; )
CDADC1   ENSSSCG00000009398 11:18351788-18351979   CU041282,CH242-47L20,11:18346553-18352055
(Clone quality: bE47L20 on chr=11; Num_of_Contigs=10; )
CDAN1   ENSSSCG00000004719 1:134776546-134786882    
CDC123 ENSSSCG00000011112 10:56644364-56691682   CU929734,CH242-242C1,10:56589457-56703078
(Clone quality: bE242C1 on chr=10; Num_of_Contigs=3; )
CDC14A   ENSSSCG00000006864 4:122529360-122721192    
CDC20   ENSSSCG00000003949 6:120243509-120247534   CU694684,CH242-210N13,6:120239819-120247647
(Clone quality: bE210N13 on chr=6; Num_of_Contigs=11; )
CDC20B   ENSSSCG00000016904 16:31721365-31847430    
Go to records:
1-99

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team