A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 2901 - 3000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CNNM3   ENSSSCG00000008201 3:52183938-52201595   FP102744,CH242-70H5,3:52166217-52203121
(Clone quality: bE70H5 on chr=3; Num_of_Contigs=11; )
CNNM4   ENSSSCG00000008202 3:52207087-52215282    
CNOT1   ENSSSCG00000002799 6:19251945-19325733    
CNOT2   ENSSSCG00000000502 5:33183472-33417601    
CNOT3   ENSSSCG00000003264 6:40564012-40579928    
CNOT4   ENSSSCG00000016528 18:12109730-12142135    
CNOT6   ENSSSCG00000014009 2:67360786-67509564    
CNOT6L   ENSSSCG00000008989 8:62657111-62727232    
CNOT7   ENSSSCG00000006986 17:4820813-4832125   CU606905,CH242-40L10,17:4819387-4842262
(Clone quality: bE40L10 on chr=17; Num_of_Contigs=4; )
CNOT8   ENSSSCG00000017067 16:65689274-65708517   CU633659,CH242-20B14,16:65657649-65722171
(Clone quality: bE20B14 on chr=16; Num_of_Contigs=6; )
CNP ENSSSCG00000017420 12:18491526-18498055   CU856598,CH242-362F6,12:18453794-18511165
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
CNPY1   ENSSSCG00000016418 18:1964304-1970939    
CNPY2   ENSSSCG00000000394 5:20713522-20716976   CU498845,CH242-111P13,5:20699391-20717983
(Clone quality: bE111P13 on chr=5; Num_of_Contigs=18; )
CNPY3 ENSSSCG00000001651 7:43861770-43872144 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
CNR1 ENSSSCG00000004309 1:59197960-59199378   CU041250,CH242-413G10,1:59191669-59220084
(Clone quality: bE413G10 on chr=1; Num_of_Contigs=3; )
CNRIP1   ENSSSCG00000008349 3:67914323-67938436    
CNTD2   ENSSSCG00000002990 6:33567315-33570567   FP102369,CH242-128M4,6:33567029-33575618
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
CNTF ENSSSCG00000013154 2:10604681-10606545   CU929527,CH242-208E7,2:10603479-10641058
(Clone quality: bE208E7 on chr=2; Num_of_Contigs=8; )
CNTLN   ENSSSCG00000005178 1:214264832-214450132    
CNTN3 ENSSSCG00000011522 13:47203381-47293508    
CNTN4 ENSSSCG00000011527 13:50005585-50199487    
CNTN5 ENSSSCG00000014975 9:30901742-31339970    
CNTN6 ENSSSCG00000011526 13:48776113-48800941    
CNTNAP2 ENSSSCG00000015461 9:103588911-103598013   CU928674,CH242-509J10,9:103580756-103606953
(Clone quality: bE509J10 on chr=9; Num_of_Contigs=7; )
CNTROB   ENSSSCG00000017968 12:50169413-50422040    
COASY   ENSSSCG00000017398 12:17815100-17819507   FP016109,CH242-242A5,12:17788506-17858714
(Clone quality: bE242A5 on chr=12; Num_of_Contigs=4; )
COBLL1   ENSSSCG00000015902 15:66438764-66637142    
COBRA1   ENSSSCG00000005846 1:294329079-294336799   CU928955,CH242-34I15,1:294322778-294354935
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
COG1   ENSSSCG00000017248 12:5857481-5872333   CU466404,CH242-455N10,12:5857365-5908364
(Clone quality: bE455N10 on chr=12; Num_of_Contigs=7; )
COG2   ENSSSCG00000010183 14:62006500-62040103   CU468914,CH242-84B3,14:62004957-62047223
(Clone quality: bE84B3 on chr=14; Num_of_Contigs=14; )
COG5   ENSSSCG00000015441 9:100183270-100365315    
COG7   ENSSSCG00000010799 10:171630-185823   CU929008,CH242-207N16,10:137774-191372
(Clone quality: bE207N16 on chr=10; Num_of_Contigs=6; )
COG8   ENSSSCG00000002759 6:12473081-12479917   FP015939,CH242-384D23,6:12465602-12559923
(Clone quality: bE384D23 on chr=6; Num_of_Contigs=2; )
COIL ENSSSCG00000017613 12:30970298-30981372   FP245413,CH242-143I10,12:30969549-30983123
(Clone quality: bE143I10 on chr=12; Num_of_Contigs=14; )
COL10A1 ENSSSCG00000004436 1:85743574-85750572   CU062641,CH242-133O6,1:85642635-85794341
(Clone quality: bE133O6 on chr=1; Num_of_Contigs=1; )
COL11A1   ENSSSCG00000006857 4:120628176-120831557    
COL11A2 ENSSSCG00000001473 7:29580939-29610542 CT737383,CH242-215D15,7:29573904-29764538
(Clone quality: bE215D15 on chr=7; Num_of_Contigs=3; ) 		 
COL12A1 ENSSSCG00000004484 1:95859639-95990154    
COL13A1   ENSSSCG00000010256 14:75801525-75890517   CT990472,CH242-325O12,14:75752136-75928284
(Clone quality: bE325O12 on chr=14; Num_of_Contigs=1; )
COL14A1 ENSSSCG00000005997 4:18341932-18616105    
COL15A1 ENSSSCG00000005380 1:252356422-252431941    
COL15A1 ENSSSCG00000005381 1:252417491-252425102   CU571046,CH242-46J18,1:252392469-252425614
(Clone quality: bE46J18 on chr=1; Num_of_Contigs=4; )
COL16A1 ENSSSCG00000003603 6:60474036-60526973    
COL17A1 ENSSSCG00000010607 14:120066639-120108932    
COL19A1 ENSSSCG00000004273 1:52527875-52866036    
COL1A2 ENSSSCG00000015326 9:69420740-69456361   CU915372,CH242-63A14,9:69407843-69460209
(Clone quality: bE63A14 on chr=9; Num_of_Contigs=2; )
COL21A1 ENSSSCG00000001500 7:33879858-34015941    
COL22A1 ENSSSCG00000005938 4:2882316-3017566   CU861599,CH242-1G3,4:2882085-3037908
(Clone quality: bE1G3 on chr=4; Num_of_Contigs=2; )
COL23A1   ENSSSCG00000014029 2:69293091-69313246   CU468334,CH242-242B23,2:69292765-69313870
(Clone quality: bE242B23 on chr=2; Num_of_Contigs=5; )
COL25A1   ENSSSCG00000009143 8:97178019-97309782    
COL27A1   ENSSSCG00000005487 1:267801206-267956630    
COL28A1   ENSSSCG00000015342 9:73100202-73186451    
COL29A1   ENSSSCG00000011186 13:1592435-1681709   CU633554,CH242-199A15,13:1536369-1697112
(Clone quality: bE199A15 on chr=13; Num_of_Contigs=1; )
COL3A1 ENSSSCG00000016034 15:88061419-88080791   CU467671,CH242-14N12,15:88029080-88150714
(Clone quality: bE14N12 on chr=15; Num_of_Contigs=4; )
COL4A1 ENSSSCG00000009544 11:77165233-77248332    
COL4A2   ENSSSCG00000009545 11:77349261-77462386    
COL4A3 ENSSSCG00000016245 15:121142895-121208597    
COL4A3BP ENSSSCG00000014081 2:73269381-73394394    
COL4A5   ENSSSCG00000012572 X:87207370-87429414    
COL4A6 ENSSSCG00000012571 X:86907578-86942811   CU856296,CH242-222M23,X:86872658-86944935
(Clone quality: bE222M23 on chr=X; Num_of_Contigs=3; )
COL5A1 ENSSSCG00000005750 1:289321453-289449374    
COL5A2 ENSSSCG00000016035 15:88097765-88149761   CU467671,CH242-14N12,15:88029080-88150714
(Clone quality: bE14N12 on chr=15; Num_of_Contigs=4; )
COL5A3 ENSSSCG00000013667 2:53494963-53531846    
COL7A1 ENSSSCG00000011355 13:26165472-26197263   CU633242,CH242-208G16,13:26093504-26215489
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
COL8A1 ENSSSCG00000011973 13:117279151-117464309    
COL8A2   ENSSSCG00000003635 6:62572235-62575956    
COL9A1 ENSSSCG00000004274 1:52902061-52966690    
coll-4 ENSSSCG00000009584 14:1167125-1208885   CU469368,CH242-181M10,14:1134838-1275802
(Clone quality: bE181M10 on chr=14; Num_of_Contigs=3; )
COMMD1   ENSSSCG00000008376 3:73327013-73467229    
COMMD10   ENSSSCG00000014223 2:108943224-109132414    
COMMD2   ENSSSCG00000011705 13:73279530-73286464   CU915458,CH242-198A13,13:73208094-73314403
(Clone quality: bE198A13 on chr=13; Num_of_Contigs=5; )
COMMD3   ENSSSCG00000011082 10:50114378-50118369   CU855495,CH242-193A5,10:50112956-50191194
(Clone quality: bE193A5 on chr=10; Num_of_Contigs=4; )
COMMD7   ENSSSCG00000007251 17:38216545-38220001   CU469238,CH242-509F7,17:38206321-38220274
(Clone quality: bE509F7 on chr=17; Num_of_Contigs=14; )
COMMD8   ENSSSCG00000008811 8:32051206-32061483   CU469276,CH242-360F6,8:32027914-32071691
(Clone quality: bE360F6 on chr=8; Num_of_Contigs=16; )
COMMD9   ENSSSCG00000013293 2:23470429-23489724 CU928703,CH242-486C6,2:23404536-23611467
(Clone quality: bE486C6 on chr=2; Num_of_Contigs=3; ) 		 
COMP ENSSSCG00000013916 2:62816352-62971603    
COMT   ENSSSCG00000010132 14:52639564-52656710   CT737290,CH242-153A5,14:52550615-52684021
(Clone quality: bE153A5 on chr=14; Num_of_Contigs=5; )
COMTD1   ENSSSCG00000010321 14:81000719-81002728   CU407134,CH242-119B10,14:80999978-81033330
(Clone quality: bE119B10 on chr=14; Num_of_Contigs=8; )
COP1 ENSSSCG00000015509 9:110873524-111071949    
COPA   ENSSSCG00000006386 4:93590711-93639478 CU207285,CH242-406N12,4:93542791-93708820
(Clone quality: bE406N12 on chr=4; Num_of_Contigs=3; ) 		 
COPB1   ENSSSCG00000013392 2:41778183-41800993   CU487223,CH242-352O9,2:41664838-41804442
(Clone quality: bE352O9 on chr=2; Num_of_Contigs=2; )
COPB2   ENSSSCG00000011662 13:65334771-65364543   CU582855,CH242-31D16,13:65319701-65366964
(Clone quality: bE31D16 on chr=13; Num_of_Contigs=9; )
COPG ENSSSCG00000011616 13:59316487-59327249   CU928115,CH242-63I22,13:59314044-59329072
(Clone quality: bE63I22 on chr=13; Num_of_Contigs=9; )
COPG2   ENSSSCG00000016553 18:16419268-16458562   CU915599,CH242-89E18,18:16414600-16459325
(Clone quality: bE89E18 on chr=18; Num_of_Contigs=5; )
COPS2   ENSSSCG00000004652 1:127891421-127920084    
COPS3   ENSSSCG00000018051 12:56897388-56920055   CU927962,CH242-273I13,12:56891060-57001521
(Clone quality: bE273I13 on chr=12; Num_of_Contigs=8; )
COPS4   ENSSSCG00000009241 8:116394181-116428053   CU694671,CH242-135K3,8:116354156-116447271
(Clone quality: bE135K3 on chr=8; Num_of_Contigs=3; )
COPS5   ENSSSCG00000006203 4:70234750-70252180   CU582915,CH242-248L23,4:70219330-70272096
(Clone quality: bE248L23 on chr=4; Num_of_Contigs=6; )
COPS7A   ENSSSCG00000000691 5:60007931-60014112   CU914489,CH242-100M5,5:60003877-60023417
(Clone quality: bE100M5 on chr=5; Num_of_Contigs=13; )
COPS7B   ENSSSCG00000016280 15:124737803-124839293    
COPZ1   ENSSSCG00000000290 5:18080339-18099538   CU466514,CH242-63P24,5:18071192-18111791
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
COPZ2   ENSSSCG00000017526 12:21743509-21754904   FP016123,CH242-397L8,12:21742773-21757011
(Clone quality: bE397L8 on chr=12; Num_of_Contigs=6; )
COQ10A   ENSSSCG00000000387 5:20587725-20591158   CU694915,CH242-453C18,5:20582151-20599340
(Clone quality: bE453C18 on chr=5; Num_of_Contigs=10; )
COQ10B   ENSSSCG00000016076 15:94877804-94893752    
COQ2   ENSSSCG00000009238 8:116245643-116265218    
COQ3   ENSSSCG00000004349 1:69709810-69720545    
COQ4   ENSSSCG00000005646 1:283391431-283403146   CU234126,CH242-282L14,1:283270038-283452033
(Clone quality: bE282L14 on chr=1; Num_of_Contigs=4; )
COQ5   ENSSSCG00000009903 14:40486327-40503205    
COQ6   ENSSSCG00000002354 7:105272680-105284626   CT797481,CH242-31K14,7:105227853-105414617
(Clone quality: bE31K14 on chr=7; Num_of_Contigs=1; )
COQ7   ENSSSCG00000007867 3:23810641-23818256   FP236408,CH242-138D10,3:23801628-23819313
(Clone quality: bE138D10 on chr=3; Num_of_Contigs=11; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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