A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 5801 - 5900:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IFT74   ENSSSCG00000005124 1:205327650-205414645   CU313306,CH242-263I20,1:205257395-205450475
(Clone quality: bE263I20 on chr=1; Num_of_Contigs=1; )
IFT80   ENSSSCG00000011733 13:78873415-78913688    
IFT81   ENSSSCG00000009818 14:31564609-31653974    
IFT88   ENSSSCG00000009270 11:108973-137059    
IgA ENSSSCG00000003017 6:34090685-34099941    
IgA ENSSSCG00000003284 6:41064930-41074740    
IgA ENSSSCG00000005485 1:267724937-267739649   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
IgA ENSSSCG00000014360 2:128952333-128952491   CU693462,CH242-200N5,2:128937308-128956225
(Clone quality: bE200N5 on chr=2; Num_of_Contigs=6; )
IGDCC3   ENSSSCG00000004932 1:170410018-170452342    
IGDCC4   ENSSSCG00000004931 1:170390013-170403202   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
IgE ENSSSCG00000006357 4:92750928-92754912   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
IgE ENSSSCG00000006413 4:94624034-94630450   CU856458,CH242-123O3,4:94614161-94682848
(Clone quality: bE123O3 on chr=4; Num_of_Contigs=6; )
IgE ENSSSCG00000011810 13:94765937-94777523   CU466378,CH242-185B2,13:94764414-94780737
(Clone quality: bE185B2 on chr=13; Num_of_Contigs=3; )
IgE ENSSSCG00000013577 2:51062170-51072262   CU929919,CH242-334A8,2:51060964-51078871
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
IGF1 ENSSSCG00000000857 5:77082628-77154428    
IGF1R ENSSSCG00000004812 1:145050345-145349833    
IGF2 ENSSSCG00000001827 7:59395972-59397683   CU571146,CH242-69O5,7:59362356-59437877
(Clone quality: bE69O5 on chr=7; Num_of_Contigs=5; )
IGF2 ENSSSCG00000008673 8:72934-332448    
IGF2 ENSSSCG00000011795 13:93473449-93508864    
IGF2AS   ENSSSCG00000008673 8:72934-332448    
IGF2BP1   ENSSSCG00000001827 7:59395972-59397683   CU571146,CH242-69O5,7:59362356-59437877
(Clone quality: bE69O5 on chr=7; Num_of_Contigs=5; )
IGF2BP2   ENSSSCG00000011795 13:93473449-93508864    
IGF2R ENSSSCG00000004042 1:8364284-8379239    
IGF2R ENSSSCG00000004044 1:8497941-8600764    
IGFALS ENSSSCG00000008013 3:35875032-35878022   CU929968,CH242-75C10,3:35871551-35889570
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
IGFBP1 ENSSSCG00000016728 18:48650114-48654870    
IGFBP3 ENSSSCG00000016729 18:48778107-48782267    
IGFBP4 ENSSSCG00000017472 12:19797073-19811336    
IGFBP5 ENSSSCG00000016178 15:112017411-112019845   CU914349,CH242-487L5,15:112013030-112021709
(Clone quality: bE487L5 on chr=15; Num_of_Contigs=9; )
IGFBP6 ENSSSCG00000000255 5:16854964-16855290   CU469296,CH242-241K11,5:16854767-16869473
(Clone quality: bE241K11 on chr=5; Num_of_Contigs=15; )
IGFBP7 ENSSSCG00000008913 8:48074809-48147152    
IGFBPL1 ENSSSCG00000005360 1:250538918-250641600    
IGH@ ENSSSCG00000013414 2:46101495-46418194    
IGHMBP2   ENSSSCG00000012878 2:2413783-2436766    
IGJ ENSSSCG00000008939 8:57357800-57366534   CU928399,CH242-512L3,8:57337653-57366952
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
IGLON5   ENSSSCG00000003227 6:39361513-39366924    
IGLV8-61   ENSSSCG00000010038 14:49638071-49638638   CU468665,CH242-288F14,14:49636880-49653559
(Clone quality: bE288F14 on chr=14; Num_of_Contigs=5; )
IgM ENSSSCG00000006455 4:96025067-96042589 CU137732,CH242-59K14,4:95974742-96142492
(Clone quality: bE59K14 on chr=4; Num_of_Contigs=4; ) 		 
IGSF1 ENSSSCG00000012667 X:105641602-105657479 CU480630,CH242-371M9,X:105592796-105667793
(Clone quality: bE371M9 on chr=X; Num_of_Contigs=8; ) 		 
IGSF10 ENSSSCG00000011717 13:74245367-74296926    
IGSF11 ENSSSCG00000011906 13:105963273-105991286   CU633693,CH242-275M20,13:105957563-106052670
(Clone quality: bE275M20 on chr=13; Num_of_Contigs=2; )
IGSF2 ENSSSCG00000006734 4:107816226-107847307   CU468873,CH242-284J24,4:107815328-107859077
(Clone quality: bE284J24 on chr=4; Num_of_Contigs=15; )
IGSF22 ENSSSCG00000013359 2:37700196-37714759   CU915335,CH242-299H5,2:37673371-37742014
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
IGSF4C ENSSSCG00000003061 6:34964060-34967939    
IGSF4D ENSSSCG00000011999 13:123897257-123966866    
IGSF5 ENSSSCG00000012071 13:143316350-143359749    
IGSF8 ENSSSCG00000006392 4:93840441-93848088 CU138477,CH242-105O19,4:93708821-93889364
(Clone quality: bE105O19 on chr=4; Num_of_Contigs=5; ) 		 
IGSF9 ENSSSCG00000006396 4:93959082-93963133   CU856127,CH242-86L20,4:93957645-93963134
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
IGSF9B   ENSSSCG00000015255 9:58909857-58933293    
IHH ENSSSCG00000016204 15:114075541-114081145    
IK ENSSSCG00000013440 2:46750854-46771652    
IK ENSSSCG00000014372 2:129369359-129384742    
IKBIP   ENSSSCG00000000885 5:80776802-80787906    
IKBKAP ENSSSCG00000005441 1:262665218-262734412   CU442740,CH242-321N10,1:262654894-262770561
(Clone quality: bE321N10 on chr=1; Num_of_Contigs=3; )
IKBKB ENSSSCG00000005934 4:1712609-2190793    
IKBKB ENSSSCG00000007030 17:11797066-11835121    
IKBKE ENSSSCG00000015644 9:131386922-131411394    
IKBKG ENSSSCG00000012825 X:123747326-123760388   CU862037,CH242-180B5,X:123746942-123765458
(Clone quality: bE180B5 on chr=X; Num_of_Contigs=12; )
IKZF1 ENSSSCG00000015629 9:128225253-128240015    
IKZF3 ENSSSCG00000017494 12:20429240-20521874    
IKZF4 ENSSSCG00000000375 5:20381332-20386120   CU457395,CH242-13B13,5:20381331-20400897
(Clone quality: bE13B13 on chr=5; Num_of_Contigs=23; )
IKZF5 ENSSSCG00000010722 14:138991388-138996149   CT956005,CH242-11G17,14:138966488-139020350
(Clone quality: bE11G17 on chr=14; Num_of_Contigs=9; )
IL10 ENSSSCG00000015652 9:131944301-131948292   CU655936,CH242-369P7,9:131941408-131957326
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL10RA ENSSSCG00000015085 9:44231877-44244316   FP102136,CH242-1A1,9:44193617-44246637
(Clone quality: bE1A1 on chr=9; Num_of_Contigs=15; )
IL11 ENSSSCG00000003293 6:41340816-41342672   FP245423,CH242-507H20,6:41340719-41344988
(Clone quality: bE507H20 on chr=6; Num_of_Contigs=16; )
IL11 ENSSSCG00000007684 3:8137632-8166975    
IL11RA ENSSSCG00000010968 10:30583162-30591642   CU928717,CH242-142N10,10:30573702-30613538
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
IL12A ENSSSCG00000011730 13:78412462-78420147   CU466518,CH242-80G23,13:78393559-78436172
(Clone quality: bE80G23 on chr=13; Num_of_Contigs=6; )
IL12B ENSSSCG00000017044 16:62019783-62031573   CU570833,CH242-250F18,16:62019299-62033781
(Clone quality: bE250F18 on chr=16; Num_of_Contigs=7; )
IL12RB1 ENSSSCG00000013894 2:62275046-62303074    
IL12RB2 ENSSSCG00000003799 6:102222763-102288351    
IL13 ENSSSCG00000014281 2:122882661-122885131 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL13RA1 ENSSSCG00000012633 X:97193929-97240532   CU856501,CH242-141A6,X:97168964-97240549
(Clone quality: bE141A6 on chr=X; Num_of_Contigs=8; )
IL13RA2 ENSSSCG00000012594 X:92327870-92364246 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
IL15 ENSSSCG00000009051 8:73715093-73846212    
IL16 ENSSSCG00000001787 7:56143279-56239320    
IL17 ENSSSCG00000001748 7:53148682-53152259   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17 ENSSSCG00000011559 13:55366120-55381913   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17A ENSSSCG00000001748 7:53148682-53152259   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17B ENSSSCG00000014434 2:135993164-135997278   CU694929,CH242-55J13,2:135975430-136052686
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
IL17D ENSSSCG00000009272 11:176082-258484    
IL17F ENSSSCG00000001749 7:53194112-53195334   CT737387,CH242-301B9,7:53164546-53326569
(Clone quality: bE301B9 on chr=7; Num_of_Contigs=2; )
IL17RA ENSSSCG00000000765 5:65217498-65222396   CU467896,CH242-34G22,5:65212731-65224619
(Clone quality: bE34G22 on chr=5; Num_of_Contigs=20; )
IL17RB ENSSSCG00000011457 13:30185246-30199813    
IL17RC ENSSSCG00000011559 13:55366120-55381913   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RD ENSSSCG00000011463 13:32591562-32693479    
IL17RE ENSSSCG00000011556 13:55321269-55364966    
IL17REL   ENSSSCG00000000983 5:100088314-100091259   FP102108,CH242-165O15,5:100082057-100094321
(Clone quality: bE165O15 on chr=5; Num_of_Contigs=15; )
IL18 ENSSSCG00000015037 9:38791272-38812597   CU657951,CH242-322L21,9:38781851-38831276
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
IL18R1 ENSSSCG00000008158 3:47478525-47483065   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL18RAP ENSSSCG00000008157 3:47435344-47462772   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL19 ENSSSCG00000015653 9:132015434-132022474   CU655936,CH242-369P7,9:132005606-132069989
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL1A ENSSSCG00000008090 3:39059355-39072049   CU855588,CH242-108K8,3:39033723-39081464
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1B ENSSSCG00000008088 3:38955442-38962433   CU855588,CH242-108K8,3:38948020-39033622
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1B ENSSSCG00000008088 3:38955442-38962433   CU855588,CH242-108K8,3:38948020-39033622
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1R1 ENSSSCG00000008162 3:47896450-47909993   CU856003,CH242-200C14,3:47889549-47912820
(Clone quality: bE200C14 on chr=3; Num_of_Contigs=5; )
IL1R2 ENSSSCG00000008163 3:48048433-48111836    
IL1RAPL1 ENSSSCG00000012196 X:25137259-25205163    
IL1RAPL2 ENSSSCG00000012545 X:84381760-84449091    
IL1RL1 ENSSSCG00000008159 3:47594795-47621810   CU929680,CH242-116J7,3:47581746-47629919
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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