A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 6101 - 6200:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ITPK1   ENSSSCG00000002457 7:122500435-122566510   CU468886,CH242-145B2,7:122436020-122571421
(Clone quality: bE145B2 on chr=7; Num_of_Contigs=2; )
ITPKA   ENSSSCG00000004746 1:136277482-136285872   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
ITPKC ENSSSCG00000003000 6:33719166-33730459   CU928654,CH242-130A3,6:33678287-33731769
(Clone quality: bE130A3 on chr=6; Num_of_Contigs=6; )
ITPR1 ENSSSCG00000011533 13:51178156-51227873    
ITPR3 ENSSSCG00000001518 7:34243825-34308622 CU481857,CH242-122A6,7:34237512-34415946
(Clone quality: bE122A6 on chr=7; Num_of_Contigs=5; ) 		 
ITPRIP   ENSSSCG00000010613 14:120362980-120364635   CU041373,CH242-42A8,14:120244674-120398124
(Clone quality: bE42A8 on chr=14; Num_of_Contigs=3; )
ITSN2   ENSSSCG00000008583 3:106677444-106717483    
IVD   ENSSSCG00000004774 1:137362220-137377017   CU234165,CH242-252B18,1:137339871-137454558
(Clone quality: bE252B18 on chr=1; Num_of_Contigs=2; )
IVL   ENSSSCG00000006595 4:100516908-100518594   CU210949,CH242-471G17,4:100442582-100566951
(Clone quality: bE471G17 on chr=4; Num_of_Contigs=4; )
IVNS1ABP ENSSSCG00000015570 9:118908927-118928310    
IWS1   ENSSSCG00000015865 15:55959051-55972597    
IYD   ENSSSCG00000004093 1:16565065-16581970    
IZUMO1 ENSSSCG00000003142 6:37634960-37638212   CU929759,CH242-294C24,6:37595303-37722216
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
JAG1 ENSSSCG00000007067 17:19688741-19725371    
JAG2 ENSSSCG00000002555 7:133157408-133176657    
JAGN1   ENSSSCG00000011558 13:55342148-55344699   CU633418,CH242-443E24,13:55338751-55347451
(Clone quality: bE443E24 on chr=13; Num_of_Contigs=9; )
JAK1 ENSSSCG00000003809 6:103915378-104010734    
JAK2 ENSSSCG00000005215 1:226776007-227058933    
JAK3 ENSSSCG00000013888 2:62084730-62099077    
JAK3 ENSSSCG00000017783 12:43013508-43100067    
JAKMIP1   ENSSSCG00000008710 8:2182348-2246561   CU929574,CH242-147B3,8:2179517-2248943
(Clone quality: bE147B3 on chr=8; Num_of_Contigs=3; )
JAKMIP2   ENSSSCG00000014420 2:134553641-134609923    
JAM3 ENSSSCG00000015256 9:59144401-59152084    
JARID2 ENSSSCG00000001061 7:11883054-12003955    
JAZF1   ENSSSCG00000016691 18:43263269-43313537    
JFC1 ENSSSCG00000003572 6:58233785-58242719   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
JHDM1D   ENSSSCG00000016501 18:7964037-8041059    
JMJD1C   ENSSSCG00000010226 14:69315608-69363005    
JMJD4   ENSSSCG00000013983 2:66113822-66119002    
JMJD5   ENSSSCG00000007818 3:17752698-17766574   CU695068,CH242-516C10,3:17751325-17766657
(Clone quality: bE516C10 on chr=3; Num_of_Contigs=21; )
JMJD7   ENSSSCG00000004741 1:136052058-136055774   FP236593,CH242-77C19,1:136049249-136061603
(Clone quality: bE77C19 on chr=1; Num_of_Contigs=12; )
JMJD8   ENSSSCG00000007988 3:35508671-35752802    
JMY   ENSSSCG00000014112 2:77182728-77245759    
JPH1   ENSSSCG00000006174 4:63701343-63898899    
JPH2   ENSSSCG00000007369 17:48427877-48432696   CU855736,CH242-249J14,17:48400298-48440601
(Clone quality: bE249J14 on chr=17; Num_of_Contigs=13; )
JPH3   ENSSSCG00000002653 6:574800-662729    
JPH4   ENSSSCG00000002014 7:81860348-81866536    
JRKL   ENSSSCG00000014973 9:29108207-29108767   CU656004,CH242-323N6,9:29107496-29110594
(Clone quality: bE323N6 on chr=9; Num_of_Contigs=15; )
JUN ENSSSCG00000001050 7:9074488-9080825   CT955989,CH242-270H7,7:9062940-9157686
(Clone quality: bE270H7 on chr=7; Num_of_Contigs=2; )
JUN ENSSSCG00000001429 7:27910968-27995163    
JUN ENSSSCG00000003361 6:43772690-43776772   FP102698,CH242-39I24,6:43772623-43778408
(Clone quality: bE39I24 on chr=6; Num_of_Contigs=5; )
JUN ENSSSCG00000003829 6:108925879-108927099   CU695066,CH242-491K2,6:108920156-108949332
(Clone quality: bE491K2 on chr=6; Num_of_Contigs=9; )
JUP ENSSSCG00000017428 12:18670277-18699144   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
K6-IRS1 ENSSSCG00000000247 5:16449670-16471717    
KAAG1 ENSSSCG00000001086 7:20225134-20225277   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAL1 ENSSSCG00000012101 X:4000171-4206020    
KALRN ENSSSCG00000011865 13:102467235-102507110    
KANK1   ENSSSCG00000005234 1:231131295-231142413    
KANK3   ENSSSCG00000013598 2:51620857-51631330   FP090904,CH242-212F1,2:51608045-51700090
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
KANK4   ENSSSCG00000003821 6:106183840-106211032   CU457462,CH242-167J19,6:106162495-106270096
(Clone quality: bE167J19 on chr=6; Num_of_Contigs=2; )
KARS   ENSSSCG00000002704 6:8707506-8723726   CU856392,CH242-53K23,6:8631869-8811363
(Clone quality: bE53K23 on chr=6; Num_of_Contigs=1; )
KAT2A   ENSSSCG00000017414 12:18370962-18379665   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
KAT5   ENSSSCG00000012980 2:4963300-5117737    
KATNA1   ENSSSCG00000004104 1:17227262-17383831    
KATNAL1   ENSSSCG00000009326 11:6442748-6483521 CU210871,CH242-347O13,11:6437073-6615100
(Clone quality: bE347O13 on chr=11; Num_of_Contigs=6; ) 		 
KATNAL2   ENSSSCG00000005770 1:290553326-290555475   CU928359,CH242-451N13,1:290552874-290612650
(Clone quality: bE451N13 on chr=1; Num_of_Contigs=4; )
KATNB1   ENSSSCG00000002813 6:19890183-19895219   CU467555,CH242-299M23,6:19889770-19895756
(Clone quality: bE299M23 on chr=6; Num_of_Contigs=20; )
KBTBD10   ENSSSCG00000015932 15:71311502-71329392    
KBTBD3   ENSSSCG00000014999 9:35481000-35507594   FP089571,CH242-190H22,9:35459837-35510608
(Clone quality: bE190H22 on chr=9; Num_of_Contigs=1; )
KBTBD4   ENSSSCG00000013227 2:13075737-13081044   CU856103,CH242-271O6,2:12985573-13119992
(Clone quality: bE271O6 on chr=2; Num_of_Contigs=3; )
KBTBD5   ENSSSCG00000011286 13:22073235-22079749   CU928031,CH242-357P22,13:22054047-22118385
(Clone quality: bE357P22 on chr=13; Num_of_Contigs=3; )
KBTBD6   ENSSSCG00000009438 11:24693865-24695952   CU651642,CH242-143O9,11:24691549-24711249
(Clone quality: bE143O9 on chr=11; Num_of_Contigs=5; )
KBTBD7   ENSSSCG00000009437 11:24619554-24621596   CU062515,CH242-111E23,11:24582104-24640471
(Clone quality: bE111E23 on chr=11; Num_of_Contigs=4; )
KBTBD8   ENSSSCG00000011500 13:40469651-40474033   CU633562,CH242-236B18,13:40450817-40474042
(Clone quality: bE236B18 on chr=13; Num_of_Contigs=12; )
KCMF1   ENSSSCG00000008242 3:54434270-54464829    
KCNA1   ENSSSCG00000000716 5:61262277-61263764   CU582813,CH242-426K5,5:61262132-61270002
(Clone quality: bE426K5 on chr=5; Num_of_Contigs=10; )
KCNA3 ENSSSCG00000006802 4:113914483-113915919   CU207230,CH242-384H21,4:113913948-113957841
(Clone quality: bE384H21 on chr=4; Num_of_Contigs=7; )
KCNA4   ENSSSCG00000013330 2:28555233-28557197 CU915386,CH242-197O2,2:28546810-28760288
(Clone quality: bE197O2 on chr=2; Num_of_Contigs=2; ) 		 
KCNA6   ENSSSCG00000000717 5:61369630-61370994   FP102533,CH242-100M9,5:61362999-61435053
(Clone quality: bE100M9 on chr=5; Num_of_Contigs=2; )
KCNAB2   ENSSSCG00000003372 6:45450619-45452701   FP102454,CH242-79J15,6:45448192-45456259
(Clone quality: bE79J15 on chr=6; Num_of_Contigs=7; )
KCNB1   ENSSSCG00000007462 17:53239157-53340928   CU062509,CH242-101F18,17:53191636-53341340
(Clone quality: bE101F18 on chr=17; Num_of_Contigs=3; )
KCNB2   ENSSSCG00000006185 4:65048373-65050983   CU469056,CH242-70H23,4:64988996-65084197
(Clone quality: bE70H23 on chr=4; Num_of_Contigs=4; )
KCNC1   ENSSSCG00000013374 2:38659285-38694204    
KCNC2   ENSSSCG00000000516 5:38261708-38502411    
KCNC4   ENSSSCG00000006810 4:114340383-114359733    
KCND2   ENSSSCG00000016621 18:24754763-24755881   CU929958,CH242-56A17,18:24741465-24756835
(Clone quality: bE56A17 on chr=18; Num_of_Contigs=5; )
KCND3   ENSSSCG00000006782 4:112808035-113021379    
KCNE1 ENSSSCG00000012049 13:139831032-139831421   CU468438,CH242-57G7,13:139758408-139835410
(Clone quality: bE57G7 on chr=13; Num_of_Contigs=2; )
KCNE1L   ENSSSCG00000012582 X:88840648-88841085   FP102602,CH242-17O13,X:88793904-88856215
(Clone quality: bE17O13 on chr=X; Num_of_Contigs=3; )
KCNE2   ENSSSCG00000012045 13:139759690-139760061   CU468438,CH242-57G7,13:139758408-139835410
(Clone quality: bE57G7 on chr=13; Num_of_Contigs=2; )
KCNE3   ENSSSCG00000014839 9:8441252-8441551   CU928090,CH242-136E14,9:8413147-8465214
(Clone quality: bE136E14 on chr=9; Num_of_Contigs=5; )
KCNE4   ENSSSCG00000016222 15:114817627-114818139   CU896599,CH242-260E21,15:114786304-114826397
(Clone quality: bE260E21 on chr=15; Num_of_Contigs=5; )
KCNG1   ENSSSCG00000007476 17:54619575-54639158 CR974477,CH242-217L7,17:54579306-54781966
(No clone quality info on bE217L7) 		 
KCNG2 ENSSSCG00000005780 1:291097214-291122296    
KCNG3   ENSSSCG00000008465 3:91341479-91394483   CU861975,CH242-29C2,3:91315848-91414198
(Clone quality: bE29C2 on chr=3; Num_of_Contigs=4; )
KCNG4   ENSSSCG00000002677 6:2997026-3009017   FP085590,CH242-130L20,6:2950464-3147598
(Clone quality: bE130L20 on chr=6; Num_of_Contigs=2; )
KCNH2 ENSSSCG00000016448 18:5361066-5376452    
KCNH3   ENSSSCG00000000203 5:14318889-14339675    
KCNH4   ENSSSCG00000017411 12:18325882-18342708   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
KCNH5   ENSSSCG00000005117 1:203953036-204047668    
KCNH6   ENSSSCG00000017295 12:12939745-12959871    
KCNH7   ENSSSCG00000015898 15:64270719-64405761    
KCNH8   ENSSSCG00000011204 13:5450394-5573851    
KCNIP1   ENSSSCG00000017003 16:50490829-50510273   CU856091,CH242-162P18,16:50481187-50564376
(Clone quality: bE162P18 on chr=16; Num_of_Contigs=3; )
KCNIP2 ENSSSCG00000010570 14:117727152-117743114    
KCNIP3 ENSSSCG00000008119 3:41558573-41567835    
KCNJ11   ENSSSCG00000013379 2:39082037-39083203   FP089535,CH242-516C12,2:39073292-39134265
(Clone quality: bE516C12 on chr=2; Num_of_Contigs=7; )
KCNJ13   ENSSSCG00000016292 15:125669400-125678801   CU466365,CH242-117P4,15:125648994-125694415
(Clone quality: bE117P4 on chr=15; Num_of_Contigs=11; )
KCNJ14   ENSSSCG00000003135 6:37490192-37493193   FP102301,CH242-20J11,6:37475901-37499164
(Clone quality: bE20J11 on chr=6; Note=In Finishing;)
KCNJ15   ENSSSCG00000012066 13:142440893-142442020   CU466352,CH242-453H4,13:142328362-142494251
(Clone quality: bE453H4 on chr=13; Num_of_Contigs=3; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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