A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 801 - 900:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ASPH ENSSSCG00000006229 4:74613582-74696991    
ASPHD2   ENSSSCG00000009959 14:44776764-44783838   CT841533,CH242-245B12,14:44759242-44823985
(Clone quality: bE245B12 on chr=14; Num_of_Contigs=7; )
ASPM   ENSSSCG00000010896 10:21161647-21206427    
ASPN   ENSSSCG00000008072 3:37453022-37479114    
ASRGL1 ENSSSCG00000013065 2:7664992-7709096    
ASTE1   ENSSSCG00000011182 13:1223886-1238101   CU468391,CH242-198D4,13:1217404-1336536
(Clone quality: bE198D4 on chr=13; Num_of_Contigs=2; )
ASTL   ENSSSCG00000008126 3:41953840-42027679    
ASTN1 ENSSSCG00000015513 9:111666916-112025075    
ASTN2   ENSSSCG00000005502 1:270408190-271210716    
ASXL1   ENSSSCG00000007248 17:38069036-38078072   CU075917,CH242-158M7,17:38014651-38109830
(Clone quality: bE158M7 on chr=17; Num_of_Contigs=7; )
ASXL2   ENSSSCG00000008575 3:105630977-105725398    
ASXL3   ENSSSCG00000003736 6:81424600-81574531    
ASZ1   ENSSSCG00000016627 18:27360547-27412030    
ATAD1   ENSSSCG00000010438 14:104672485-104741774    
ATAD2   ENSSSCG00000005983 4:15590532-15657584    
ATBF1   ENSSSCG00000002752 6:11156755-11256719    
ATE1   ENSSSCG00000010699 14:137754459-137916665    
ATF1 ENSSSCG00000016847 16:20441100-20441582   CU633723,CH242-522B12,16:20437423-20444873
(Clone quality: bE522B12 on chr=16; Num_of_Contigs=19; )
ATF2 ENSSSCG00000015972 15:75905746-76025052    
ATF2 ENSSSCG00000016847 16:20441100-20441582   CU633723,CH242-522B12,16:20437423-20444873
(Clone quality: bE522B12 on chr=16; Num_of_Contigs=19; )
ATF3 ENSSSCG00000015595 9:123225230-123237460    
ATF4 ENSSSCG00000000084 5:5062591-5064668   CU424445,CH242-128A11,5:5029969-5093393
(Clone quality: bE128A11 on chr=5; Num_of_Contigs=8; )
ATF5 ENSSSCG00000003201 6:38624735-38627251   CU464193,CH242-278I19,6:38623409-38646899
(Clone quality: bE278I19 on chr=6; Num_of_Contigs=12; )
ATF6 ENSSSCG00000006346 4:92291550-92486277    
ATF7 ENSSSCG00000000278 5:17282499-17306281   CU928648,CH242-523B11,5:17274658-17333972
(Clone quality: bE523B11 on chr=5; Num_of_Contigs=8; )
ATF7IP   ENSSSCG00000000612 5:55106636-55171022    
ATG12 ENSSSCG00000014220 2:108684028-108700206    
ATG16L1   ENSSSCG00000016300 15:126228103-126270179    
ATG16L2   ENSSSCG00000014819 9:6979934-6993398   CU694608,CH242-349P16,9:6959324-7004274
(Clone quality: bE349P16 on chr=9; Num_of_Contigs=4; )
ATG2B   ENSSSCG00000002502 7:126444772-126524372   CU633930,CH242-67N6,7:126414601-126572725
(Clone quality: bE67N6 on chr=7; Num_of_Contigs=2; )
ATG3   ENSSSCG00000011930 13:109888655-109918847    
ATG4A   ENSSSCG00000012569 X:86724128-86904448    
ATG4C   ENSSSCG00000003816 6:105495136-105577945   CU467524,CH242-188P17,6:105489671-105579164
(Clone quality: bE188P17 on chr=6; Num_of_Contigs=6; )
ATG4D   ENSSSCG00000013645 2:52961252-52969079   CU993813,CH242-86K24,2:52943491-52988729
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
ATG5   ENSSSCG00000004370 1:75884869-75910222    
ATG7   ENSSSCG00000011575 13:56032507-56080590   CU915532,CH242-98O11,13:56030144-56092732
(Clone quality: bE98O11 on chr=13; Num_of_Contigs=3; )
ATG9A   ENSSSCG00000016211 15:114251285-114260087    
ATHL1   ENSSSCG00000014562 2:139903415-139909011   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
ATIC   ENSSSCG00000016173 15:110700540-110931082    
ATL2   ENSSSCG00000008487 3:94935004-95028975    
ATL3   ENSSSCG00000013054 2:6895331-6936849    
ATM ENSSSCG00000010489 14:111712241-111714699   CU392852,CH242-517O10,14:111696262-111826906
(Clone quality: bE517O10 on chr=14; Num_of_Contigs=2; )
ATM ENSSSCG00000015007 9:35998717-36015437   CU464170,CH242-497A10,9:35993120-36064035
(Clone quality: bE497A10 on chr=9; Num_of_Contigs=4; )
ATOH1   ENSSSCG00000009196 8:107872512-107873573   CU464003,CH242-220H23,8:107843572-107959060
(Clone quality: bE220H23 on chr=8; Num_of_Contigs=3; )
ATOH8   ENSSSCG00000008230 3:54029193-54040001   CU928286,CH242-219K12,3:54011146-54043118
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
ATP10A   ENSSSCG00000004830 1:149061228-149111747    
ATP10D   ENSSSCG00000008812 8:32122853-32198678    
ATP11C   ENSSSCG00000012713 X:112382382-112478082   CU582842,CH242-1I19,X:112356591-112507809
(Clone quality: bE1I19 on chr=X; Num_of_Contigs=2; )
ATP12A   ENSSSCG00000009577 11:79781734-79795640    
ATP13A1   ENSSSCG00000013930 2:63356154-63376247    
ATP13A2   ENSSSCG00000003480 6:52086112-52115649    
ATP13A3   ENSSSCG00000011825 13:98954433-99035987    
ATP13A4   ENSSSCG00000011821 13:98611342-98681842    
ATP1A1 ENSSSCG00000006740 4:108659640-108679554   CU302284,CH242-488D4,4:108656809-108684101
(Clone quality: bE488D4 on chr=4; Num_of_Contigs=9; )
ATP1A2   ENSSSCG00000006391 4:93788196-93812587 CU138477,CH242-105O19,4:93708821-93889364
(Clone quality: bE105O19 on chr=4; Num_of_Contigs=5; ) 		 
ATP1A3   ENSSSCG00000003045 6:34648631-34665650   FP015926,CH242-183C8,6:34644556-34665777
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
ATP1B1 ENSSSCG00000006296 4:85270018-85293969    
ATP1B2   ENSSSCG00000017951 12:50007012-50011730 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
ATP1B4   ENSSSCG00000012606 X:95914706-96018092    
ATP2A1   ENSSSCG00000007805 3:16659991-16680428    
ATP2A2 ENSSSCG00000009819 14:31714261-31775391    
ATP2A3 ENSSSCG00000017874 12:47316615-47326109   CU655866,CH242-344D10,12:47312999-47327464
(Clone quality: bE344D10 on chr=12; Num_of_Contigs=11; )
ATP2B1 ENSSSCG00000000921 5:87958687-87973227   CU457444,CH242-365K13,5:87952870-87991764
(Clone quality: bE365K13 on chr=5; Num_of_Contigs=4; )
ATP2B2   ENSSSCG00000011574 13:55811337-55871957    
ATP2B3   ENSSSCG00000012769 X:122393823-122429082   FP102397,CH242-79A9,X:122391234-122447282
(Clone quality: bE79A9 on chr=X; Num_of_Contigs=14; )
ATP2B4 ENSSSCG00000015273 9:62098645-62151712   CU655999,CH242-299D21,9:62090071-62174337
(Clone quality: bE299D21 on chr=9; Num_of_Contigs=9; )
ATP2C1   ENSSSCG00000011183 13:1249887-1328579   CU468391,CH242-198D4,13:1217404-1336536
(Clone quality: bE198D4 on chr=13; Num_of_Contigs=2; )
ATP2C2   ENSSSCG00000002671 6:2688377-2735738   CU929750,CH242-270I23,6:2633205-2758929
(Clone quality: bE270I23 on chr=6; Num_of_Contigs=2; )
ATP4A ENSSSCG00000002902 6:30223955-30233620    
ATP4B ENSSSCG00000009561 11:79008423-79013507    
ATP5A1 ENSSSCG00000004499 1:99745958-99757458    
ATP5B   ENSSSCG00000000405 5:21065668-21073312   CU468457,CH242-203P23,5:21058663-21129178
(Clone quality: bE203P23 on chr=5; Num_of_Contigs=4; )
ATP5D   ENSSSCG00000013431 2:46464450-46466764   CU929580,CH242-161G11,2:46462241-46469291
(Clone quality: bE161G11 on chr=2; Num_of_Contigs=11; )
ATP5E   ENSSSCG00000007524 17:61787508-61791474 CR956646,CH242-247L10,17:61655968-61825296
(No clone quality info on bE247L10) 		 
ATP5F1   ENSSSCG00000006789 4:113256712-113267882   CU311186,CH242-230C12,4:113251594-113376287
(Clone quality: bE230C12 on chr=4; Num_of_Contigs=3; )
ATP5G1   ENSSSCG00000017544 12:22664940-22667646   CU928816,CH242-243D3,12:22660971-22676496
(Clone quality: bE243D3 on chr=12; Num_of_Contigs=4; )
ATP5G3   ENSSSCG00000015973 15:76039382-76042926   CU694603,CH242-31D5,15:76024022-76113924
(Clone quality: bE31D5 on chr=15; Num_of_Contigs=5; )
ATP5I   ENSSSCG00000009024 8:68045253-68045435   CU466350,CH242-443A19,8:68043482-68069709
(Clone quality: bE443A19 on chr=8; Num_of_Contigs=5; )
ATP5L   ENSSSCG00000015096 9:44591824-44600359   CU914235,CH242-177G19,9:44486144-44604301
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
ATP5O   ENSSSCG00000012042 13:139184603-139191352   CU633388,CH242-288H9,13:139184370-139201880
(Clone quality: bE288H9 on chr=13; Num_of_Contigs=7; )
ATP5S   ENSSSCG00000005017 1:188442159-188453154   CU222525,CH242-175F12,1:188296962-188466073
(Clone quality: bE175F12 on chr=1; Num_of_Contigs=2; )
ATP5SL   ENSSSCG00000003009 6:33947819-33952777   FP236582,CH242-238L13,6:33921264-33956509
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
ATP6AP1L   ENSSSCG00000014132 2:79976481-80145727    
ATP6AP2   ENSSSCG00000012247 X:35985462-36014108   FP067431,CH242-266E24,X:35968800-36049228
(Clone quality: bE266E24 on chr=X; Num_of_Contigs=2; )
ATP6V0A2 ENSSSCG00000009766 14:29364203-29408693   CU468658,CH242-245F7,14:29355652-29557150
(Clone quality: bE245F7 on chr=14; Num_of_Contigs=1; )
ATP6V0A4   ENSSSCG00000016516 18:9146945-9186243   FP236752,CH242-135G1,18:9146556-9190823
(Clone quality: bE135G1 on chr=18; Num_of_Contigs=4; )
ATP6V0C   ENSSSCG00000008056 3:36846110-36852218    
ATP6V0D1   ENSSSCG00000002776 6:13082481-13124323   CU929737,CH242-250E5,6:13062455-13202086
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
ATP6V0D2   ENSSSCG00000006138 4:52454752-52509961   CU639431,CH242-112A22,4:52429951-52607836
(Clone quality: bE112A22 on chr=4; Num_of_Contigs=2; )
ATP6V0E1   ENSSSCG00000016990 16:48691321-48697547   CU915673,CH242-496E1,16:48677396-48698363
(Clone quality: bE496E1 on chr=16; Num_of_Contigs=8; )
ATP6V1A ENSSSCG00000011916 13:109085986-109149852    
ATP6V1B2   ENSSSCG00000009602 14:4009079-4037068   CT737416,CH242-177M15,14:4002126-4156991
(Clone quality: bE177M15 on chr=14; Num_of_Contigs=1; )
ATP6V1C1   ENSSSCG00000006054 4:34413480-34463880    
ATP6V1C2   ENSSSCG00000008634 3:116602235-116652362    
ATP6V1D   ENSSSCG00000002288 7:99474673-99493431   CT967298,CH242-176H11,7:99387011-99569801
(Clone quality: bE176H11 on chr=7; Num_of_Contigs=1; )
ATP6V1E1 ENSSSCG00000000767 5:65444700-65464650    
ATP6V1E2   ENSSSCG00000008441 3:87441099-87441779   CU855724,CH242-31C18,3:87438278-87446148
(Clone quality: bE31C18 on chr=3; Num_of_Contigs=5; )
ATP6V1G2 ENSSSCG00000001401 7:27630405-27632063 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
ATP6V1G3   ENSSSCG00000010905 10:22499730-22522663    
ATP6V1H   ENSSSCG00000006263 4:80311864-80370177    
Go to records:
1-100

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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